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13-6054-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3866270 [Map]; Strand: c
      • AT1G11480.1 - [+] show detail - eukaryotic translation initiation factor-related
        Distance: 0; Region: exon2 (CDS)
      • AT1G11480.2 - [+] show detail - eukaryotic translation initiation factor-related
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-6054-1 - 5-prime edge
    NGNTAAACTA ACAAAATCGG TTATACGATA ACGGTCGGTA CGGGATTTTC 
    CCATCCTACT TTCATCCATT TCAGTGAAGA TGAACGGAAG CCTCTGGATG
    GTCACTCTGC TCCTCGTAGA GTGGTCAGTG ATGATGTTTT TCGGTTTGCG
    AATAACCGTT TGGAGATGAA AGCAGACTCG GTTTTAGCNT GGGAGGCATA
    GTGGTTGGGC AGCTGGTCCT TTGACTCATT CTGGGACTGG TAATATTGAG
    AACTCAGTGT CAGGAAATCA CTCTAATATT TGGAATGGGA GGAAGGAGGT
    ATCAGTTGCT AACAATGAGC CTGGACAGTC TCCATGGACT AAACAACCAG
    CTGTTTCGAA TTTGGTCCAT ACAAGTGCGC TTGACCAAGT GTCTTCAGGA
    GGATGGCAGT CCAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3866283 [Map]; Strand: c
      • AT1G11480.1 - [+] show detail - eukaryotic translation initiation factor-related
        Distance: 0; Region: exon2 (CDS)
      • AT1G11480.2 - [+] show detail - eukaryotic translation initiation factor-related
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-6054-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTTACGTC 
    CGATATTGAC ATTGTGAGGC AGAAACAGTG ATTTATCATC GAGATTTCTA
    ATAGCATGAG ACGAACTCGG TCTTGCTCTC TGATCTGGCC TGCCAATTGA
    ATT

AT1G11480.1

Model type
Protein coding
Short Description
eukaryotic translation initiation factor-related
Computational Description
eukaryotic translation initiation factor-related; Has 394 Blast hits to 370 proteins in 111 species: Archae - 0; Bacteria - 23; Metazoa - 177; Fungi - 53; Plants - 82; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11480.2

Model type
Protein coding
Short Description
eukaryotic translation initiation factor-related
Computational Description
eukaryotic translation initiation factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 398 Blast hits to 374 proteins in 109 species: Archae - 0; Bacteria - 21; Metazoa - 180; Fungi - 52; Plants - 82; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR