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13-6059-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3253005 [Map]; Strand: w
      • AT1G09970.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G09970.2 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-6059-1 - 5-prime edge 
    TAGGCGATAA TCCGTTTGAT GCGACGGCTG ATTTCCCGGT GGAGGTTGTT 
    TCTCTGAAGA AACTCTCGTG GCTTTACTTG TCGAATTGCA GTATCGCCGG 
    AAAAATTCCA CCGGCGATTG GAGATTTGAC NGGAGCNTTC GGAATTTGGA 
    GATTTCCGAT AGCGGATTAA CCGGAGAGAT TCCGTCGGAG ATTTCGAAAC 
    TTACTAATCT CTGGCAGTTA GAGCTTTACA ACAACTCCTT GACCGGAAAA 
    CTTCCTACCG GATTCGGAAA CTTGAAGAAT CTGACTTACT TGGACGCTTC 
    AACAAATCTT CTACAAGGCG ATTTATCGGA GCTTAGGTCT CTGACTAATC 
    TCGTTTCACT ACAAATGTTC GAAAACGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3252889 [Map]; Strand: w
      • AT1G09970.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G09970.2 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-6059-1 - 3-prime edge 
    ATCGCCTAGG CTCAAAACGA CGAGACTCGT TGCGTTTCGG AGCGATTTCC 
    ACGGAAAGAC GCCGGAAAAA GCGCTGTTGT TGAGATACAG AAACTGTAAC 
    TGATTTAAAG ATGAGAACTC AGGGAAAGCA CCGGAGAATA AATTGTTGCC 
    GAGATCCAAA TACTTCAAAC TCGTGCAGTT TTTCAAATCG CTGGGGATTA 
    TTCCAGATAG TGAATTGAAT CCGAGAGAGA GTTTCTCGAG ACTCTGAATC 
    TCACAAACCG AATCGAATGG AAAATTCCCA GATAAACCTC GACGAGAGAG 
    ATCAATCTCT GTAACGTTGC CTCTAGAATT ACAGGTTACT CCGATGAAGC 
    TACAAGGACC GATACCGGAG TTCAGTTTCC AGGAATCGAA CACGGCGAGA 
    TTGGAATCGG CGAATGATGA TTTGAGCTTG AGTAAGACTT GGAGATCGTC 
    GGAAGAAACG ACGGAGAATA GAGAGAAGAC GAGGAAGGTG GAGAAGCGGT 
    GAAAGAAGTT GAAATTCCTT AACGACGGAG CCATGTCGGA GAGAAGAAGT 
    GGTGACGGTG GTTTGAGTTG ATCGGAAACT TGTTTTTTCA CATCGGGAAA 
    TTTGGTTAGA GGAGAAGAGA GAGAGAGAGA GNGGCGNGCG CGANAAAAAA 
    GCTACCANCC CGGGCCGTNN ACCACCGTGN NCNNTNTA

AT1G09970.1

Model type
Protein coding
Short Description
Leucine-rich receptor-like protein kinase family protein
Curator Summary
RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress.
Computational Description
LRR XI-23; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G19700.1); Has 209037 Blast hits to 140396 proteins in 4701 species: Archae - 173; Bacteria - 22554; Metazoa - 63531; Fungi - 11010; Plants - 85931; Viruses - 478; Other Eukaryotes - 25360 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G09970.2

Model type
Protein coding
Short Description
Leucine-rich receptor-like protein kinase family protein
Curator Summary
RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress.
Computational Description
LRR XI-23; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G19700.1); Has 205125 Blast hits to 136515 proteins in 4580 species: Archae - 168; Bacteria - 22290; Metazoa - 61642; Fungi - 10712; Plants - 85268; Viruses - 403; Other Eukaryotes - 24642 (source: NCBI BLink).
Link
InterPro Scan - TAIR