1. Home
  2. Mutant Lines
  3. 13-6093-1

13-6093-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 11380589 [Map]; Strand: c
      • AT2G26710.1 - [+] show detail - Cytochrome P450 superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-6093-1 - 5-prime edge 
    AGGAGAGCTA AAGTTTTCTT CTTTGGTCTC TTTTGAGTGC CGGAGAAAGA 
    GGGAATGAGG TGTTAAAAAG GAGGATTTAT TTCTTCTTTT TTTAATTCGT 
    TTTTTTTTTT TTNCCCTTTN GGTTTTTNGN NAANNGGGGT TNTTTTNNNT 
    TNGNTTTTTT TNGGNANNNT TNGNNNGGGG NNNNTTTTNN NCCTTTNNNG 
    GGNNNNNTNC NAAAAAAANT TTTNAAAAAA AAAAAAANNN NCCCNNCCCN 
    CCCCCNGGGG NCCCCCNTTG GGGNNNCNGG NNGGGNNNNN AAANNGGGGG 
    TTTTTTTTAA AANNAAAAAA NNNNNNTTTN NCCANTTTNN TTAANTTTTA 
    AAAAAAAGGN NAANNNACNC TTTTTTTTTT TNNAAAAAAN GGGGGNNNAA 
    AGGNGNAANC CTTTTTTTTT TTCNTCCNGG GNAAAAANNN CNNGGGGGGG 
    GGNANCNNCC CNCNCCCNNN AAAAAAAAAA A

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 11380723 [Map]; Strand: c
      • AT2G26710.1 - [+] show detail - Cytochrome P450 superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-6093-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACAA TGGAGGAAGA AAGTAGCAGC 
    TGGTTCATTC CAAAGGTTCT TGTTCTGTCT GTAATCTTAA GTCTTGTAAT 
    AGTGAAGGGT ATGTCTCTGT TATGGTGGAG ACCAAGAAAG ATTGAAGAAC 
    ATTTCTCTAA ACAAGGAATT

AT2G26710.1

Model type
Protein coding
Short Description
Cytochrome P450 superfamily protein
Curator Summary
Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion.
Computational Description
PHYB ACTIVATION TAGGED SUPPRESSOR 1 (BAS1); FUNCTIONS IN: steroid hydroxylase activity, oxygen binding; INVOLVED IN: response to light stimulus, response to brassinosteroid stimulus, brassinosteroid homeostasis, brassinosteroid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 8 (TAIR:AT3G14620.1); Has 34717 Blast hits to 34565 proteins in 1738 species: Archae - 71; Bacteria - 6148; Metazoa - 11470; Fungi - 6879; Plants - 8435; Viruses - 3; Other Eukaryotes - 1711 (source: NCBI BLink).
Link
InterPro Scan - TAIR