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13-6128-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2558016 [Map]; Strand: c
      • AT1G08150.1 - [+] show detail - Cation/hydrogen exchanger family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-6128-1 - 5-prime edge 
    CTCATTTTAG CCTTCGGTGG TTACTACTTT TTGAAGGAAA TTCACATGTT 
    TCCGGCTGTT GGACCCTTCC TTTTGGGTTT GTGTGTGCCT CACGGTCCTC 
    CTCTAGGGTC TCAACTGGTA GAAAAGTTTG AAAGCT

AT1G08150.1

Model type
Protein coding
Short Description
Cation/hydrogen exchanger family protein
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
ATCHX5; FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 6A (TAIR:AT1G08140.1); Has 2700 Blast hits to 2678 proteins in 819 species: Archae - 128; Bacteria - 1881; Metazoa - 0; Fungi - 113; Plants - 529; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Link
InterPro Scan - TAIR