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13-6132-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2550344 [Map]; Strand: w
      • AT1G08135.1 - [+] show detail - cation/H+ exchanger 6B
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-6132-1 - 5-prime edge 
    GTNNAAACTA ACAAAATCGG TTATACGATA ACGGTCGGTA CGGGATTTTC 
    CCATCCTACT TTCATCTCAG GGGTAAAAAA ATGCCCTCGT TGAAGCTATC 
    GAATTTTTGT ATAAATACTG ATCCTAATGG CGGCCCGTTA GGGACAGCCA 
    AACCAAGAGC AAATGCCCCT AGCGGTCCGA AGAATAAGAA GCAGGCTCCA 
    ATAAAGATAA GATAAGTAAG CAAGCAAGAG ACCAATGTAG AGATAGACGT 
    TCTTCACCGG GGCTCCTTCT GGCGTATGTC TTATAACCCA AAGCATAAAT 
    TGTCGCACAA GGTACACAAA AATAAAGAAT GCCATAAAAG CTAATCCCAT 
    TTTCACTCCT TGAGTTTCAT CACGGCTAAC GTAAGCCGAT ACAGTCAAGA 
    AAAAGGCAAG CAAATCTGTT

AT1G08135.1

Model type
Protein coding
Short Description
cation/H+ exchanger 6B
Computational Description
cation/H+ exchanger 6B (CHX6B); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: Cation/hydrogen exchanger family protein (TAIR:AT2G28170.1); Has 1422 Blast hits to 1406 proteins in 439 species: Archae - 64; Bacteria - 709; Metazoa - 0; Fungi - 111; Plants - 510; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).
Link
InterPro Scan - TAIR