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15-0125-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19665905 [Map]; Strand: w
      • AT2G48080.1 - [+] show detail - oxidoreductase, 2OG-Fe(II) oxygenase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 15-0125-1 - 5-prime edge 
    GGNNNNACNA CNNGCNCCAA GAACANNATC CCACATNCCA TCGCGGATNA 
    CTCNTATTCN GGANTCAGAC CNCAGNNNAN NATNANGGAN GATANCACCT 
    TTGGACAAGG GTNGGGATAG GTTCCNCNTG CANGGACGGG TTATAAATTA 
    GGAGATGGTA TGTATATGTA CTAGAAATAG NGGAAGCACC AAGTCCCTGC 
    CTTGTTGTCA TTACCAGAGT GTTCATCCGT GGTGTTGNCG AAAATAGGAA 
    CTCCAAGCTG AAGAAGCTNT CTTTTGGTTC CCTTGGTGTT NTTGTTGAAC 
    AGAACGAAGG TCTCCCATTG CATTTGAGAT GAGAGAAACT TACTCTCGTG 
    TGTAAGGTTT ATGAAAGAAA AAAAGAATGG AATTAAATTC AAAGGATAAA 
    ATCACCTGAA AGTTGGTGAT TCCGACCAGC CTCTCGGAGC TGATTAATAG 
    AATCCAGAAG CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19665794 [Map]; Strand: w
      • AT2G48080.1 - [+] show detail - oxidoreductase, 2OG-Fe(II) oxygenase family protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 15-0125-1 - 3-prime edge 
    CTTACTTNCN CTTNCATTNA CNNANTNCAG ATNACCCTNT GTCGNTCCTT 
    CCTTCCAGCT AAGGNTAGGG ATTGTTTTCN GGACGAACAC TCTCAACCAT 
    TTCNGAACCC TNCTCACNTG GNNCAACCCA TATTCNCTCN TGCCTTGTCN 
    GAATCAACCA TGGTGNTGGG GCNCAGACTC GGGGTCGATA ACGANGGCAA 
    CATTNAAAGG CNTCACTCAN TCTCCCACTT TAAGGAAGGT TAATGGAAAC 
    ACTCCCCCGA TGTCCATATG ATACCNTAAC TCACAAATAT TGTNNCTGTA 
    NNCCTGAACC CACATGCGTC AGCCTCACAN AAAATACAGC TCTAAGGATN 
    ACCCNCCNNG GCCGNCNANC ACGCGNGCCC TATATACCAA GCAGAANNNT 
    ACCCCAANGA AGAGTACTAA TTCCNNNTCT CNTTTTAAAT GAGNCAAATA 
    NAGNANAAGA GNACCGNCCA ANNNCACNAG NNTNATNAAT ATNNNTNNAT 
    NAGCACNAAA CCGGAGAANA GNTTTNGGTT GNCCNTCAAA GNNNTNAGTN 
    TNTNTAANAA NCCCNANATT NNGGNNGCAN NGGANANANC ACGNNNCGTG 
    GTNTATAANN GTAANCNTTA TATTATTTAN GNNNNNTTGN TANNNNNNTT 
    GNGNGCGCNN CANTNCTGTT TNNCNTCANT TNTGTNNGTG TNGTNANNAC 
    NTNACTNTNG TTANNNAATG TTCTNAAGGN NNNNNNTNNA NCNNNGNGCA 
    NCNTTGCNTC NCNGTGNNAG NCGATGCTTA

AT2G48080.1

Model type
Protein coding
Short Description
oxidoreductase, 2OG-Fe(II) oxygenase family protein
Computational Description
oxidoreductase, 2OG-Fe(II) oxygenase family protein; BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G02940.1); Has 179 Blast hits to 160 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 24; Fungi - 0; Plants - 151; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR