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15-0166-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14975479 [Map]; Strand: c
      • AT4G30720.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-0166-1 - 5-prime edge 
    ATAACCGGAC TCGAGTCGAT TCAATTTGAA ATGAAAGGAT AACTCATTAG 
    ACACAGAGAC GAGCTTTTTA GTTTGAGCTC TCTCTCACTA TGTCTCTCTC 
    GCAAACGAAT TTCCTCAGTT CTTCATTACT CTCATCGAGC CATGACCTGC 
    GAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14975595 [Map]; Strand: c
      • AT4G30720.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: -76; Region: promoter
    Flanking Genome Sequence: 15-0166-1 - 3-prime edge 
    CCGGTTATAC ATTAATCGTT GATTTTAATC CGGTTCGGCT GATATGGTTT 
    TCGTTTTTGA ATTTGTCTTG TATAATGAGA ACCGAAGTTT TCAATTTATT 
    CGGATGGTAC CTACCCAAGT GCATGCAACN TTACAATTTT GATCACCTCT 
    GAACCGTGTG ACAATAATCC CTTACTAGAA GCT

AT4G30720.1

Model type
Protein coding
Short Description
FAD/NAD(P)-binding oxidoreductase family protein
Curator Summary
Encodes a putative oxidoreductase/electron carrier detected in the chloroplast stroma that is essential to ensure a correct electron flow through the photosynthetic chain and, hence, photosynthesis efficiency and normal growth. Mutations in the Col-0 allele result in pale green pigmentation and defective growth.
Computational Description
FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, FAD binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Adrenodoxin reductase (InterPro:IPR000759), FAD dependent oxidoreductase (InterPro:IPR006076), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); Has 2466 Blast hits to 2466 proteins in 951 species: Archae - 126; Bacteria - 2117; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 195 (source: NCBI BLink).
Link
InterPro Scan - TAIR