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15-0227-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25760922 [Map]; Strand: w
      • AT5G64420.1 - [+] show detail - DNA polymerase V family
        Distance: 0; Region: exon8 (CDS)
    Flanking Genome Sequence: 15-0227-1 - 3-prime edge 
    TNACANAANT TTNACACAAN GAAANGGTAG NAGTCTTTTA CCGACCGTTA 
    CCGACCGTTT TCATCTTCCT TCAGATGGGT CGTCATTGTT TTTCTCGAAT 
    CTGCTTGGGT GTTTTCGTTT ATAGGAATCA ACGATCTCAG AGTTTCAGTG 
    ATCAAATCAA GAGCTTCCAG TCTACGGAAC TCAACATTTG CATTCACACT 
    TGCCTCCAGA AGGAAACCAA ACAGTTGGTG TCCAATCCAT GGTCTCCTTC 
    TAAACACTTC CTCAAGAAAA TCTATCTTCA ACTGAGACTT CCTGCTATCA 
    AAGTACCCGG TAACAGCACT CCGAAACACA TCCAAGATC

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25713523 [Map]; Strand: w
      • AT5G64280.1 - [+] show detail - dicarboxylate transporter 2.2
        Distance: -50; Region: promoter
    Flanking Genome Sequence: 15-0227-1 - 5-prime edge 
    ACTTTCTCAC CGGAGGAGCG AAACTCTCTG TTTGTTGTCT TTATTAAAAA 
    AAGTTAAATA AAAACGTTAT TCTTATTTTC CCCATTATTC ATATTTTACT 
    AATTAAAAGA TAATTTAGCT AAAACTTTAA AATTAAGAAG TATTCAAAAT 
    TTTCACATTT GGATTAACTT GTTTGTATTT TGTATGACCA TAAAACGAAA 
    TTACCAAATT ACAGTATGTG TTATCTTTTC GAAAATTCAG AATTATTTAC 
    TGAATCAAGT AAAAACTCAT GATCGTTTGT TTACTATAAA TACTCTCTCT 
    TGATTTTCAT GATTGTTTGA AGACTTGTTT AGTTTCTGAG ATCATAAATG 
    TTGATAATGA TCATAATCAA GATAATGATG GTGAACATGA AATACCATAT 
    ATCAAAATAT ATATCTTAAG AAAAAGTGAC AAGAATCCTA GTCGTTAATC 
    CGATATTTAT CCTTAAGTTT ATTTCAAATT TGTCAAATAA GCTGATTTAT 
    TTTATAATTT TTTTGTAGGA TTTCCCTTGT GAAGTTATTT TTCAAGTTTT 
    TATAACATAT TCTATAGACA TNGTNGAATA ACAAAACAAC AAAACGGNGG 
    GGATTGTACC ATAAAAACAT CATATCNTCA AAGCACAATT AATGAAAGTG 
    ATGCCTTGNG GCGCTAACTT ATTTTNGCGT TNAGCTTCAT GTCNGTGCTC 
    TCA

AT5G64280.1

Model type
Protein coding
Short Description
dicarboxylate transporter 2.2
Computational Description
dicarboxylate transporter 2.2 (DiT2.2); FUNCTIONS IN: oxoglutarate:malate antiporter activity; INVOLVED IN: malate transport, sodium ion transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/sulphate symporter (InterPro:IPR001898); BEST Arabidopsis thaliana protein match is: dicarboxylate transport 2.1 (TAIR:AT5G64290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64420.1

Model type
Protein coding
Short Description
DNA polymerase V family
Computational Description
DNA polymerase V family; FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding; INVOLVED IN: DNA replication, transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase V (InterPro:IPR007015); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR