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Mutant Lines
15-0232-1

15-0232-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 2520340 [Map]; Strand: w
  - AT3G07890.1 - [+] show detail - Ypt/Rab-GAP domain of gyp1p superfamily protein
    Distance: -965; Region: promoter
  - AT3G07900.1 - [+] show detail - O-fucosyltransferase family protein
    Distance: -434; Region: promoter
Flanking Genome Sequence: 15-0232-1 - 5-prime edge
```
GGATTAAGTA GTGTCGCCGG TAAGATACAA GATGAATAAA GCGACTATAT 
TAATTAGAGG ATAATAATAT TCAAACCGAT ATCTCTAAAA ATTAACGGAC 
TTTTCTACTA CTTGGACCAN C
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 2520254 [Map]; Strand: w
- AT3G07890.1 - [+] show detail - Ypt/Rab-GAP domain of gyp1p superfamily protein
  Distance: -879; Region: promoter
- AT3G07900.1 - [+] show detail - O-fucosyltransferase family protein
  Distance: -520; Region: promoter

CTTAATCCCA CCTTAGTCTG TGATTTTAAT TCATTGNGCA GTAAAGAGAG 
CTGGTTTCGT CCCCTTGGTG GGAATGCATA TTTTGTTTTT TTAATTTCTC 
ATAAGTAAAA CGAACAAGAT CATATATCTA GACGTAGATG AATCCAATAG 
TGTTTGGTAC GTAATTAAAC TTTGCATATG GTTCGAGTAA CAAAAACATA 
TATGCATATT GTATAGTTTG AACGATTTGG GAGGGATAAA CAAAGGTTAG 
AGTTAGAGAC TCAAAGTTTA TCAAGGTTAG TGGAGTCGTG GACTCACGTA 
TCTTTGAAGC AAAACTGATA ATAAAATCAA TTATGGGATA CCATATACAT 
TGTTCTCAAA CCATAGAATA ATATGTATAT TACAATTAAT CGTAGAAAAA 
TGTACCTGTC TTTATCATAT GAACATCACA TTAGATACAT ATGCTATATG 
TCACTTCAGC ACGTTTTATT ACCGACGAAT TGNGGAATTG GAAATTTAAA 
ATTTAATAAA TCCAGGGTTA ATAATTATTT TACATCGGCT CTTTCTCTCT 
CTATCTTGNC ANTTTAAATC TGATTTGAAN CATCANAGAA ATTGCCTTTA 
TTTAACACAT NNGTTTATGN AATTCCNCNT TNGGCCTNAG AAANGACAGA 
GCCCATCAAT ANAANNAAGT TCAGGGCTTN TNTTAGNCAT TAACGAAAAG 
TNAGGANANN NCATG

AT3G07890.1

Model type: Protein coding
Short Description: Ypt/Rab-GAP domain of gyp1p superfamily protein
Computational Description: Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G37290.1); Has 5103 Blast hits to 5093 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 2600; Fungi - 1061; Plants - 534; Viruses - 0; Other Eukaryotes - 908 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G07900.1

Model type: Protein coding
Short Description: O-fucosyltransferase family protein
Computational Description: O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G44500.1); Has 833 Blast hits to 829 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 833; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR