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15-0239-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7550642 [Map]; Strand: w
      • AT1G21540.1 - [+] show detail - AMP-dependent synthetase and ligase family protein
        Distance: -77; Region: promoter
    Flanking Genome Sequence: 15-0239-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATNNCT GGGTGACGCA ACAGCGCCNN ACGTACAGNC 
    TNNNANTGAG CNCGCGGATC ACCAGANAGG GCCGTGAANA ACGNNNGNAA 
    ATATAATGAG TTTTAATTTA TTAACTNANG GNAAATACNA AATTTGGTTA 
    ATAAATAANA AGAAATCTCT CTCTTTTTTT NTTTTAANCA AAATTTATTG 
    GTGAGTGACG NGAGTATATA AAAAAGNAGG GGGGNGGATA AATAANGGAN 
    AAAGTTTACN AACTAGGNAA GGAGAGAAAA NTTNGANGGG AGCCAACCAA 
    NNNNTTTATA GNTATAAAAA AANAAAGNGN CNGCGNNCGT ATAANAAGAN 
    NTAGNAGGGA AGAAGGGAAN GANANGAGAG GNGGAGNGAN GNNNNGAGAN 
    AAAAAGNGGG GGGGGGGNGA ANNNAGAGGG AGGNGGNATA AAGNNGGNAN 
    NANTTANATA AGNAAGGNGG NNNGNGCNAN AANAAGGNGN NGNANNAGGA 
    ANNANGGAGG NAGTAAAAAA NANGGGGGGG GNGTNGGGGG GNANAAATNA 
    AAATTNNNGA NAGGNNNGTN ANNNGNANGN NAGANNNNGN NNANGAANAN 
    NNNNANNTAN NAGAAAAAAN GNAGGNNAAN AGNGAGAANN AAAGNGNNNN 
    GANANNNAGA AGANGNNNNN GGGANGTNAA TTANNTTAAC ATGNNTGAGG 
    TGAAAGAGAA GGNANNGGGA NANTGGGGAT GANNNGNGGN NAGNNNANAA 
    NAGAAGAGNN AAGNNNAANN GNNGNAGNGN ANGANCAAAA AAANANGNNN 
    NAAG

AT1G21540.1

Model type
Protein coding
Short Description
AMP-dependent synthetase and ligase family protein
Computational Description
AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G21530.2); Has 76629 Blast hits to 70171 proteins in 3593 species: Archae - 1132; Bacteria - 50179; Metazoa - 3309; Fungi - 3660; Plants - 2281; Viruses - 1; Other Eukaryotes - 16067 (source: NCBI BLink).
Link
InterPro Scan - TAIR