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15-0240-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 419864 [Map]; Strand: w
      • AT4G00970.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 41
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 15-0240-1 - 5-prime edge 
    GTCATAAAGA GTTTACAAAA TACATAAATA TTCCAATACA ATCTACCATG 
    AATGCAAATA AAAGAAATTG AAACAATGTC TATGAATGAA AAGAGAGTAA 
    CCAAGCTATT TTTACACNTT ATGCTAACAA ACGATATTCC CCTCCACATT 
    CTTTTTATTG GCTATCAGGC ATCAGCTTGC TGCTAGTGCT GAGAAACCAA 
    AATGCTCTTG ACATTACTTT AACTAGTAGG TATAGATTCA ATGTTGTTGG 
    AGATGATTCT GGATCTTATC TCCTCCTTGA AACCAATATA CTCGATGCTT 
    CCGGTAGAAA TCCTCTACGT TCCTTTGGGA GTCTCCGTAG TCTTTTTATT 
    GCCATAATGA ATGTCTCCGT GCCACCAAAA TATGATTGAT GGTATTTTCA 
    ACAGAACATG ACACTCACAA AACTTCATAT ATTTCATCAG AGGCAACAAT 
    GTGAGCGAGA CAAAAACTAA TCTAATCCAG TTTATTCGAG CAAATAGAGA 
    AAACTAATCT CACATGAGAT GAGTAGTTCA TGTTGCGGTT TATTCTTATG 
    ACATGAGATG AAGGTTTGTA ACCAANCAAA GTAATCGCCA TCAATGATTT 
    NTCATCTCAA AAAGAGACAT CACCTTNNTT TNGAAACCAA NCCCCCAANG 
    ACTTGANCTN TTGACNGNGG TTANTAAATA CTCN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 419748 [Map]; Strand: w
      • AT4G00970.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 41
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 15-0240-1 - 3-prime edge 
    TTTATGACAT AAAATATTTG ATTTGTCGGG AAAGATNATA AACATGAGAA 
    AAGATTAATA ACCTTATAAA CTGCACCGAA GCCACCTTCT CCAAGTTGAT 
    TGTCACGAGA GAAGTCATTA GTTGCTAATC TTATGGTATC AAAGTCAAGT 
    TGCAATAATT GTGCATCTTT AATCATAAGC TCTTCANGAT CTTTGCCTGA 
    TCCAAAAGCA ATAAAACCAA AAGGGTCTTT TAAAGTTAAA ACTCTCGACA 
    AGATTGTTTT TCAAACTTTG AAGATTTGAC TTTCTGACTA ATAAGCCCAC 
    CTTCATGTCT CTGTTTTGCC GTTCTTCTGT TCCTTGTCAT AAAGATGTAA 
    AGAAAGACTG CGATTATAGC AAAACCAATA ACAGAGCAAA CGGNGGCAAT 
    AATGATTTTT ACTTTGCCAT TTCCTGCTAA GATTAAATTT GTCAAGACAT 
    ACACTGTTAG AACAAAGAAA ATAATTGTAG AATACAAGTG TTGAGACAGA 
    GTGCTCTGAT TACCTGGTTT GGGATCAGGC TCATACTCGG AGTCNAGAAG 
    GAANAATCTC AAGTCACTCT CTATCTGAAA ATTACAGCTT GGACAAAACC 
    ACCTGGGACC AACTCTTCCT TTTGGTCGCG TTNCCNAANC CTAANAAAGA 
    CANTNNTNGN NNNTTTNTAA NACAANNNNG NGGGGNCTGG GCGNGNCCAA 
    G

AT4G00970.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 41
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 41 (CRK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 29 (TAIR:AT4G21410.1); Has 118247 Blast hits to 116820 proteins in 4488 species: Archae - 94; Bacteria - 12773; Metazoa - 43795; Fungi - 10171; Plants - 33437; Viruses - 407; Other Eukaryotes - 17570 (source: NCBI BLink).
Link
InterPro Scan - TAIR