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15-0245-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14974963 [Map]; Strand: w
      • AT4G30720.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 15-0245-1 - 3-prime edge
    ATTTTCAGTG ATTAGGAAAT CTTTTGACGC TAGGAAGGTA GGTTTCAGTT 
    TGATTCCACA TATTATGTTG TATTGTAGTT TCAAGTGAGT GAAGTTTTCA
    TCTTTTGTTT AGATTCTGAA AGAAGCCAAG TTTGTTTACA CCTGTGGATT
    TGGATGTGAA GACGCTCCTT GAGTTAGAGC CTCGTGCTCA TGATTTCATT
    TTCCGGTTAG AGCCTAAGAT TGGGCTTATT GAACATGTGC CTACCGAGAA
    GAGTGTTTCA GGGGACTTGA TCAGTGTGGT GAATGACTGT AAAAGGATCA
    ACAGTGAGAC AGCATCCGGA GAATATGAAC CTCAGATTAT CAATGGCTCT
    GGAGATCCAC ACCATCATGG AGGAGGACGA AGCAAACCGA AAATTGCAGT
    TGTTGGTGGT GGTCCATCGG GTTTGTTTGC TGCTCTTGTA CTTGCAGAGT
    TCGGTGCAGA TGTGACATTG ATTGAAAGAG GGCAAGCAGT ANAAGAAAGG
    GGACGTGATA TAGGCGCTTT GGTAGNTCNC AAGATTTTGG ATATGGAGAG
    TAATTTCTGC TTTGGCGAGG GTTAAAAAAA CCCTTNTCTT NANNCTTTNG
    CTANNTTTTC TTTGNTATTG NCAAAGCNTN NTTTANCCCC TTNTGCATCC
    NAGGNGGGGN CNGGNCCTTG GANNGATGGA AANNTNNNNN NCNNGGGNNG
    NNNACCNANN CNNNGNNCN
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14975079 [Map]; Strand: w
      • AT4G30720.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-0245-1 - 5-prime edge
    CTGAAAATGC TTCTTCTGGC AGCATTGAAG CAACCTGAAA CAAAACCCAA 
    TTTATCAAAA AAAATCCAAT ATCATCATAC GCATAAGATA AAGTTTCGGA
    ACTTTCCACC GGAGAACTCA CCCGGAAACT CGATAACTTT AGCGANGGCT
    NGAAGCAAAC CTTCTGAAAT CCCNANAAAG TCCTTTNCAG GGGGCATNTC
    CGNCAGGAAC TCCGNGCCTA GAAAGAAACC NAANTTNTTT NTGCTCCNGC
    CNCGGGGCGC GCGNGCCGCN GCGCGGNGNN NGTAANNGNG NGNNNNNANG
    GGGGGGGGAG NGNNCCNAGN GCCNNCGNNG TAGGGGGGGG GCNNNNNGGG
    GGGNGNGNGN NGNGCGGNGN GNCTNCNCGG GGGAGTGGGG GNNNNNGAGG
    GNGNGGAGGA AGGANGNGNG NNNAGGNNNN GNGNNGNGNG NCNNNNNNNG
    NNNGGNGGGN NGNGNGGNAN ANNANNNNNC GAGNNNNCGT GCGGNGNANG
    NNANNGNNNN NGGNANNNAN NNNANGNNCG NGAGNANGNA GNAGNANNAN
    AGNGANANGG GNNNNANGNN GNNNNGNNNG NGGNNGGNNG NGNNGNNNGN
    GAGGNNGNGG AGNNCCGGGN GNNGGGNANN NGNNNGAGNG CNNNNNGGGT
    NNGNNGGNGA GGAGACNNAA GCGGNGNNNG GNANANANNG ANGNGGGGNN
    GGNGNNNNNG NAGGNGGGNN TNNNNGNCNA TNGNANGNAN GNGCGGGNGG
    NGNNNGNGGG NAGGGNGGAG GNNGGGG

AT4G30720.1

Model type
Protein coding
Short Description
FAD/NAD(P)-binding oxidoreductase family protein
Curator Summary
Encodes a putative oxidoreductase/electron carrier detected in the chloroplast stroma that is essential to ensure a correct electron flow through the photosynthetic chain and, hence, photosynthesis efficiency and normal growth. Mutations in the Col-0 allele result in pale green pigmentation and defective growth.
Computational Description
FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, FAD binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Adrenodoxin reductase (InterPro:IPR000759), FAD dependent oxidoreductase (InterPro:IPR006076), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); Has 2466 Blast hits to 2466 proteins in 951 species: Archae - 126; Bacteria - 2117; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 195 (source: NCBI BLink).
Link
InterPro Scan - TAIR