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15-0272-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 364756 [Map]; Strand: c
      • AT4G00872.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
        Distance: -20; Region: promoter
    Flanking Genome Sequence: 15-0272-1 - 5-prime edge 
    CTCATGAGTC ATGACCAACC ATATTCTTAG TTTATATAAG TAATTCACAC 
    CCCTTAAAAA GAAACATAGT CTATAATCAA TCATACTTAG CATGAAAACG 
    ATGATCAAGT TTCTGCTGTT AATACNTGGT GATCTCTCCT ATGTCGATAT 
    GCGCCGAGAA GGACATGATG ATAAATGAAT GCCACAATGC AGACGTCCCA 
    GCCATATGCA TGCAATGTCT TGAATCCGAC CCAAACTCCA TTCACGCCGA 
    CCATATAGGC ATAGCTGGCA TCGTCATAAA CTGTCTTGAA TCCCACCTCC 
    ATATCATCAC CAAGCAAGTT TTCACTTACA AATTATAACC AATATACAGA 
    AATATCCTCT AATATATCAA TTTTTTCATT TGTGTAGTAA CATAACGAAT 
    TTATCGTCNN AGAAAGATAA AGGNGAAGTG AAAACAGCTC TGGGGATTTG 
    CAAAAAANAC TTGNNNACNA ATGGATNTNC AATACTGGNG GGAGCCNAAA 
    CAANNTTNGA AANCGGGGGN NTNTGTTTNA ANNNNCAA

AT4G00872.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily protein
Computational Description
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G56100.2); Has 34 Blast hits to 34 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR