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15-0387-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15838459 [Map]; Strand: c
      • AT2G37780.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -157; Region: promoter
      • AT2G37790.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: -305; Region: promoter
    Flanking Genome Sequence: 15-0387-1 - 5-prime edge 
    GTCATGAAGA ACATATCAAC TCTAAATTCA TGTATAATAT CAACAATTTG 
    TAACAGAAAA ATTATATCAC AAGTGACATA TTCTTCCCTA TGATCATTCA 
    ACTCCAACAA AGTCAACTAA AATAATAACT ATTTGTATCA ATTTTATTGC 
    ATATTTTGGA TACACNTTCC TTTGATAAGA GAATACAGAT CAAAAAACCT 
    TTTGGCTTCC CCACAAACCA ACCTCAAGGA TGTCAATACC GCAAACGATT 
    CAACATTTCA CGCATAATCA TCTCTTAACT CAAGTCAACG GTATTGGCAC 
    ATACACTTGT GATGGTTGCA AATTGTACGG TGAAGGCAGG ACCTACCGGT 
    GCAGCGACTG CGACTATGAT CTCCATGAAT ATTGCGCCAC GTGTCCTTCG 
    ATTCTCTTAA ACTCATGTCA CGGTCCTGAT CATGAGCTTA GCCTGTTCAA 
    CGGNCACATG ACCGAACGCT CGTGCTATGT TTGCCGAGTT TCTATCCAAG 
    GGATGTTCTA CNNATGTNNG CAATGNNGNN NNGAAGCTNA NCCGNNNTGN 
    NNNTANNGNN NNANGCANGC NNNGNNTNCN GANTNNNGGT TNCNANGNNN 
    NNAANNNTNN NGGGNNNNNN GGAANNNNNN NGNNNNNNNN NGGGGNGGNN 
    NNGNNNNCCN NNNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15484152 [Map]; Strand: w
      • AT2G36885.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloro...
        Distance: -441; Region: promoter
      • AT2G36885.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloro...
        Distance: -446; Region: promoter
    Flanking Genome Sequence: 15-0387-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT CCATTCAGAA TGTAGTAGAC GTGTATAATG 
    GAAAATCGCC TTGAGATGTT AACATATACG ATTATGAATT ATTGACATGT 
    AACTATTCAA TATAATACTA GTAGTCCCTG TGTACTATAT AAGAAGAAGA 
    ATGAACAATT CTTAAAAAGA CAATACTAAA TTATTGATTA GTAACNTGTT 
    GATTATTACA GCAACTATAC ATTATACAGT GGCTAAGCCA CAGTAATAAA 
    GGTTATACGT GTTGGTGGTT TACCTCGTAT CAGTTAGGTA CTGTTGATAG 
    CCTCTAGATG AATTAGAGGG TTTCAATAAG GCTCACGTGA GAGTCACGTG 
    GGAAGGAATC GGAGCGTGTT GTATCCACGC GAAAAGGGTA AAACGACAGC 
    GTTTGAATAC TAACGTCGTG TCACTTTCTT CACCTTTCTC AGACTATCTC 
    CTATTCTCCT TCCCTACCAC TTNCCTCACT TTACCAACAC AAACNCTANG 
    CTCTNTTNTN TNNTGGNGGN NATNNCNGGA TTNTNCNNTN TTTNNNCCNN 
    NGNNNNT

AT2G36885.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 172 Blast hits to 172 proteins in 58 species: Archae - 0; Bacteria - 116; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G36885.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G37780.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G37820.1); Has 2672 Blast hits to 1981 proteins in 235 species: Archae - 0; Bacteria - 73; Metazoa - 736; Fungi - 340; Plants - 1267; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G37790.1

Model type
Protein coding
Short Description
NAD(P)-linked oxidoreductase superfamily protein
Computational Description
NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37770.2); Has 24755 Blast hits to 24730 proteins in 2482 species: Archae - 413; Bacteria - 16802; Metazoa - 2096; Fungi - 1772; Plants - 1239; Viruses - 0; Other Eukaryotes - 2433 (source: NCBI BLink).
Link
InterPro Scan - TAIR