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15-0415-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25346349 [Map]; Strand: w
      • AT5G63190.1 - [+] show detail - MA3 domain-containing protein
        Distance: 0; Region: exon2 (CDS)
      • AT5G63190.2 - [+] show detail - MA3 domain-containing protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-0415-1 - 5-prime edge
    CTNTNGGGNA AGGACCAGNT GCTGGGATTC CTAATAGGCA TGTGCNACGT 
    ACTCACTCAG GGAAGCATAT TCGTGTTAAG AAGGGTATTA AACTTTCTTC
    AACCTTTTGT GCTTGTTATT TGGCTAATAG ATCCTTTTAG TGAGTGATAT
    GACTCTTTAT TAGTTCCTTT CAAATTTGCT TTAGTGAAAA GACTTAAGTT
    TTCAGTAGAA GAGTTCAAGT GTGTAGGTGA TATATGGTNT ACTTGTGTGG
    CAATGATATN TGCANANGGN GCTGGTGGCA AANGAACTTG GGGAAAGCTN
    CCAA
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25346233 [Map]; Strand: w
      • AT5G63190.1 - [+] show detail - MA3 domain-containing protein
        Distance: 0; Region: exon2 (CDS)
      • AT5G63190.2 - [+] show detail - MA3 domain-containing protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-0415-1 - 3-prime edge
    GCCACCAGTG GGAGACTTAA TGTTCAGATC AGCAAAGAGA GTATGAGATT 
    TAGGCGATGA TGACAAACTT CCAGAATTAT GAGTTGCTAT TTCAAGCT

AT5G63190.1

Model type
Protein coding
Short Description
MA3 domain-containing protein
Computational Description
MA3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT3G48390.1); Has 1948 Blast hits to 791 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 1230; Fungi - 12; Plants - 571; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G63190.2

Model type
Protein coding
Short Description
MA3 domain-containing protein
Computational Description
MA3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT3G48390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR