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15-0547-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7656093 [Map]; Strand: w
      • AT1G21790.1 - [+] show detail - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
        Distance: 210; Region: intergenic
      • AT1G21800.1 - [+] show detail - pre-tRNA
        Distance: 27; Region: intergenic
    Flanking Genome Sequence: 15-0547-1 - 5-prime edge 
    AATCTATTAG GAAAGTTTGT TTAGTGTTGA GTTGATGAAG TTTGGTCCGG 
    TTCAGTTTCC ACCAATGTTT GGAAGAAAAA AAAATGCAAG ANCATGANAG 
    GTCCTACCGG GAGTCGAACC CAGGTCGCTG GATTCAAAGN CCAGAGTGCT 
    AACCACTACA CCATAGAACC TCAGGTGCTT GTTCTGTTGC ATGTNCCAGT 
    TTANAATCTA ATCCAAAATA TTGTATTTTA GACACGACCA ATGAATAGAT 
    TCAACATCAG CAGTTCAGCA GCACCACAGA TTGCAGTTTT CTTTGTCTTT 
    ATCTAACCAA ACAAAACAAA AATCAATATT TTACTTGGTG ACAATGCATC 
    ATATGAGACC ATCAAACTGG TGACNGTGAA ATANCCAAGA TGAATCTCNC 
    AAGACATAAC CGTTAANAAN ATTACNCTNT GTANCAAAAN AACCAGGGGG 
    ATCTTTTTGC TTCTACCAGT CAAAATTTGA AATTNTGGGA ANAAATCCCN 
    CTTAACACCN AATTGGTTNT NNCCTTTTCC CCCAANAACN ACCCTTTGGN 
    TTCNCCTAAA CCCCCAAATT ANCGGGGTTT TTCCTTNNAG GGAAAACCGG 
    GGCAAAACCG GTGNGATTTT NNNAAAACNC CCCTGGGTTN GGGAAATTAT 
    TAAAGAACCC TNGTNNNANN CCCAAAAAAA NAACAAGGGG GNGGGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7656030 [Map]; Strand: w
      • AT1G21790.1 - [+] show detail - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
        Distance: 147; Region: intergenic
      • AT1G21800.1 - [+] show detail - pre-tRNA
        Distance: 90; Region: intergenic
    Flanking Genome Sequence: 15-0547-1 - 3-prime edge 
    TNTNAAAACG GNAGAGGTAT TTTACNGCCC GGGCCGGACG CGCACGCNTG 
    CCTTATAGAT TGAAAAGATT ATACCAAAAT TTAACTGAAT AAACCAAAGT 
    TCATTAAGAT TAACTTTTAT ATAATGATTA TGATATATAA ATCACAACCA 
    AAGATCAA

AT1G21790.1

Model type
Protein coding
Short Description
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Computational Description
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); Has 174 Blast hits to 174 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21800.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Gln (anticodon: TTG)
Link
InterPro Scan - TAIR