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15-0575-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7611454 [Map]; Strand: w
      • AT1G21670.1 - [+] show detail - LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structure...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0575-1 - 5-prime edge 
    GNGATAAACN AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCG AAGAGTCATC ACTTTAACCC GTTTCTTTCC 
    CCTGACTCGT CCCGAGTCGG ATACCATAGC TGCAGAGGTG ACGCAACTGG 
    ACGTAAAACT CCTCGGAATC TCCTCCAAAG CCTCAAAACA ACTTCAAACG 
    ACCTCTCTCT CTTCAGATTC GACGGTGCNG TTCCCGTCTA TCTCGCCGGA 
    AGGTGACAGA TTCGCGTTCG TCTCTTTCAC AGGCGTTTTC GTGGTGAACC 
    CAGATGGTTC AGGTCTACGT CAATTGCTTC CACAAATGGG ATTTGGAACA 
    GTTTGGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7611405 [Map]; Strand: w
      • AT1G21670.1 - [+] show detail - LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structure...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0575-1 - 3-prime edge 
    CTCTTCGGCG AGACTAAACG AGTCAACTCG ACGAACTCGT TCTTCTTTAA 
    ATCGAAAAGC TCCACGTGGC GGATTTCTGA TCCAGGCCTC CTTGTAGCCA 
    CCGCGATGAA GTTGTTATTG TTTGGTGACG TGGCGGGTGT GAAAGCGTGA 
    AGACCCGGTG GTGTGACTCT TTGAATCGTA ACCGTTTTGG TGTTAACAGG 
    TCCGGTTTTG GGTAAAATCG CTCGGTACAC GCTGATCCAA CCGTCGTCAC 
    TTTTCCGGTG GAAATACAGA GTCGAGTCAT CGACCCATCT CGGCCACCCG 
    CCTTGCTCGA CCACCTTGAC TCGCTGAGTT CCATCCTGAG TCAGGAAAAC 
    GTAGACGTCT GAGCTAATCT CTTTCTCCAC CATGCTCCAT GTCCATCCTT 
    TCTCTCCAAA CGAAGCCACG GCAGTCCACT TCCCAGACGG TGACACCGCC 
    GGAGAAAAAT CAGCGATTCC AGGTGGTGTT AACCGACGAG TCGACTTAGT 
    TCGTAACTCC GTCGAGTAAA CAGCGGCCCA ACTCGCCATG GGCTTACCCG 
    GATTCTCATA TGTCGACACG TGGACAAGAT AGCCGTTAGT TAAAACAGGC 
    GTGTCTTTCA TCGAATTTAC ATTCATGCCA CTCTGTTGTT CCTCGCCGGA 
    AAATAACGGA ACCTGAATT

AT1G21670.1

Model type
Protein coding
Computational Description
LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller (InterPro:IPR011659), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: DPP6 N-terminal domain-like protein (TAIR:AT1G21680.1); Has 8461 Blast hits to 5060 proteins in 1257 species: Archae - 79; Bacteria - 5567; Metazoa - 37; Fungi - 70; Plants - 117; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink).
Link
InterPro Scan - TAIR