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15-0620-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7654778 [Map]; Strand: w
      • AT1G21790.1 - [+] show detail - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-0620-1 - 5-prime edge 
    GTTGGTATTA GTCAATTTTC CTTTGGTGCT GTGTTTTCAC GGTTTCATTG 
    CTTAATGTGA TTCTTATTTC CGATTGGATT AGTCTTATGA TTGATTGCCA 
    TAGCTTGAGT ATAATGCAGT TCTTTCTTCG TTAAGCCTTA CTGATTATGA 
    TTTTTCATCT TCAACACTGC TCTTGTGTTA CTACAGTGGT TTTCATACTT 
    CTCAATCAAT GCTTAGCCAA AGGTTTAGAC GGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7654662 [Map]; Strand: w
      • AT1G21790.1 - [+] show detail - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-0620-1 - 3-prime edge 
    ATACCAACGA CCAATGTGCA CACCTATGAT AAAATTTCCC CACTAACAGA 
    GCACAATCCT ATAGTAAGAA CTCAAATATA AGAGAAGAGA GAAAGGGACC 
    TGATGCGGAG GTGATGATTG AGTGCAAAAG CGAGACAGAG GTATTAACAA 
    ATATAGGGTC ACGAGAAATC CATGAACGAA CAACCCAATT CATCAATTGA 
    AAGAAGCATC CACCGCAAAT CACCCAGAGA AGCTCCGTCC GGAGATTGAA 
    AGCAATCTCA AACACGACGG AGACAAGCCA AAGAAGCAGC GTCGCTAAGA 
    AAAACTGCCC AGCCCCATTC TTTTTCCCTC CTGAACTCCC AATCCCGTTC 
    CTCGCCATCG AAACCTCTCT GTCTCTCTCG GAGATTGCTT GAGAATCCGG 
    CAAAGTTAAC CCTAAATTGG ATTCTTAGCT CAAACTTCGA TATCCATTTC 
    CAATTTTGGC GGAAGAGACG ATACAAATGC CTTCACGTTA TAAGCT

AT1G21790.1

Model type
Protein coding
Short Description
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Computational Description
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); Has 174 Blast hits to 174 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR