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15-0686-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3987142 [Map]; Strand: c
      • AT1G11800.1 - [+] show detail - endonuclease/exonuclease/phosphatase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0686-1 - 5-prime edge 
    GTCGTCTTGG TCCTGCAACA AATGTACTTT CCTCAATTCT GCGTCTCAGA 
    AACTCAATTG CATGATCTGC TTGGCTCCTG TATCTCTCCC TTCTTTGTCT 
    CCTCCTCCAC CTTCTCTCTC AATTTCCGCG AACGATGAAG CTAAATGGGC 
    TTGCAAGGCC TGTACTTTTT TGAACACGTA CAAGAACTCA ATCTGTGACG 
    TCTGTGGAAC ACGATCGCCA ACGTCTTCTC TCTTGGGATT TCAGGATTTG 
    ACTGATTCGG GTCTCGAGAG TAACGACGCT GATTCCTCCG TCGGGTCTAT 
    TTTCTTTCCT CTGCGGCGGT GTATCAAGCG TAAAGCTATG GATGATGACG 
    TCGTCGAGGT CGATGGTGCT TCTGTTGTTT GCTCTGAATC GCAAGGTGTC 
    ATGAAGAAGA ACAAAGAGAT TGAAACGAAA GGTCGGTTTT TTTCTACTCC 
    CTAGGGTTTT AGGTCTTTGN GAATTTTGGT ATACTCATTG NGGCTCATAC 
    CTTAGATATC AGTTTGAAAG ACNAGACTTA TTACTGATGA TTNCCTGNTT 
    CATCTAAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3987258 [Map]; Strand: c
      • AT1G11800.1 - [+] show detail - endonuclease/exonuclease/phosphatase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0686-1 - 3-prime edge 
    AAGACGACGA CATTGCTCGA CTTGTGACAA TTCTCAGAAA TCGGATTGTT 
    GTTGACATTT ACCCTAATTA GTTTTTATCG ATTTTGATTT TTTGACGCTT 
    CGGTTTTCAT TTAACGGCTA CGTGTTATTA TTATACGACA TCGTTTTGGA 
    CAAAGAAGAT GGTTTACAAT TTCAATGTTT AAATTTGAAA GGTGAACCGT 
    AATCAAACCG AAACTAACCG AAGTATACCC ATATACCAGA AGACAGAATT 
    AGCTGTTGGG GAATACAACA AAAACAAAAA CATACTATTT AGGAGACAAA 
    TTTTATACAA AATTTTATTG TCAAGAGACT AAAATCTATA CTAGCATTTT 
    CGAAGTACAT CTCTTGGCAA TAAAATTTAG ATGACTAGTT TTAGTCTATT 
    GTCTTTCTTT TTCTAAGATC GATCCTAAAT GTATTGACAT GAACATGATC 
    ATGTCTATTG CAAAAACCTG TCATTCTATC TTCAAACTTT AAGAAGAAGA 
    GGGGGAAAAA CTCCTACGTT TAAAATGAGT AAGTCTATTT TTCAACTCGG 
    AAGAACAAAA TGTTGGATTT GCAGTGATGT AGGTATCTTC AGGACAAGGA 
    ATCGCTAAGC CACCCATTGG ATGATCAAAC CTTGACTCGC TCTCGAAATT 
    ACTAATGAAA GCT

AT1G11800.1

Model type
Protein coding
Short Description
endonuclease/exonuclease/phosphatase family protein
Computational Description
endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Zinc finger, RanBP2-type (InterPro:IPR001876); Has 386 Blast hits to 366 proteins in 96 species: Archae - 0; Bacteria - 14; Metazoa - 170; Fungi - 14; Plants - 104; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Link
InterPro Scan - TAIR