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15-0725-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19796559 [Map]; Strand: c
      • AT1G53130.1 - [+] show detail - Stigma-specific Stig1 family protein
        Distance: -1015; Region: intergenic
      • AT1G53140.1 - [+] show detail - Dynamin related protein 5A
        Distance: -2679; Region: intergenic
    Flanking Genome Sequence: 15-0725-1 - 5-prime edge 
    TGTACATGCA CTTTGATGAT TTCAAAGAGC ACTTGTGCTG TTTTGTTTCA 
    GTCATGTGTG TTGTTTGTTC CATTATGGTT TTTAGCCTAA ATTAATTAGT 
    TTGACTCTCT TTTCTTATTG TTTTCGTACA CNGAAGTCAC GGAATCTAAT 
    TCATACTCGA GATCAAACAA GTTTCAAATT TACATAATAA AGGTATTATA 
    ATACAACAGA ACAAATGTAA CCTTTTATCA TCAATAATAT TGATTCAATT 
    ATGATATGTA TTGAAAAATG CATTCACGTT CTTGACAGTT ATACATAAAT 
    CGTATGTAAC AGAAGCAAAG GAAATGGATT GGTAGTTTTG TGTCTTGACG 
    GTAATGCTGA TGTTTCTGAA AAAAAAGTAG CAATCAACAA AGTCATAGAA 
    AAGCTAAAGT GACAGAAAGT AAAAATACGT TAGTAAAGAT AATAATGGTA 
    CAATACTCAA GTATTTTNTT TGNTTGTGAA CCGAAATTTA TTAATGTNCG 
    AATTTTACCT TNACGATTTT ACTNATTGCT GGACTACTAT NTNGACTTNG 
    ACTTCCANAT ATACTNTCTA CAAAAGTAAC ATAAAGATTT TNAAATTATG 
    TGAAAAACTA ATNGNNGATG AGAAAAAGNC AAATGGACCG NTTTGNNNCA 
    TANNACCCTA TATGTTTANG AATGNACNTG CCNATTNNGT

AT1G53130.1

Model type
Protein coding
Short Description
Stigma-specific Stig1 family protein
Curator Summary
Encodes GRIM REAPER (GRI), involved in the regulation of cell death induced by extracellular ROS (reactive oxygen species). Secreted into the extracellular space.
Computational Description
GRIM REAPER (GRI); CONTAINS InterPro DOMAIN/s: Stigma-specific protein Stig1 (InterPro:IPR006969); BEST Arabidopsis thaliana protein match is: Stigma-specific Stig1 family protein (TAIR:AT4G26880.1); Has 276 Blast hits to 191 proteins in 30 species: Archae - 0; Bacteria - 84; Metazoa - 0; Fungi - 32; Plants - 157; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G53140.1

Model type
Protein coding
Short Description
Dynamin related protein 5A
Curator Summary
Encodes DRP5A, a dynamin protein involved in cytokinesis in Arabidopsis.
Computational Description
Dynamin related protein 5A (DRP5A); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: cytokinesis; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin, GTPase domain (InterPro:IPR001401); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G19720.1); Has 2347 Blast hits to 2342 proteins in 280 species: Archae - 0; Bacteria - 0; Metazoa - 1001; Fungi - 589; Plants - 464; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink).
Link
InterPro Scan - TAIR