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15-0751-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 286213 [Map]; Strand: c
      • AT2G01650.1 - [+] show detail - plant UBX domain-containing protein 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0751-1 - 5-prime edge 
    CTCTGCACCA CCCGTTAACC CGATTCAGAA CCGGTTTAAC TCTTCCCAAG 
    CTCCCAATCC GACTCCTAGA CCCAAACCCA ATCCAAATCC GTTGCCTGAG 
    AAACCCTTAT CCTCCTCCGA TCAGAAGATT AGTGGGTCAA CGAGAAACCC 
    GGATCATGAC CCGGTTCGTG CTCCACAAGA TGGGTTTGAC CCGTACGGTG 
    CTTTCATAAC GTCTTCGAAC AGATCTCAGA ACGGATATTC TCTGAGCATG 
    TTCGAGTGTC CGATTTGTAA AAATCCATTC ACGTCAGAGG AAGAAGTCTC 
    TGTTCATGTC GAGAGCTGTC TTGGGGACAC TAATGGAGAC GAATCTTCAT 
    TTGAGAAGGA TAATAATGAT AACGATAAAT CCGAAATGGA GAAACTTGTG 
    GTTGTGTATC TCTCTGGGAA GCCAAGTGAG AGCTCTATTG ATGTTTTGCT 
    TAGGTTGTTT AAGAACATAG TGAAAGAACC TGAGAATGCT AAGTTTAGAA 
    AAGTTAGAAT GAGTAATGCT AAGATTAAAG AAGCTATTGG TGATGTTGCT 
    GGAGGTGTCG AGCTTCTTGA GTTGGTTGGT TTTGAATTGA AAGAGGAAAA 
    TGATGAGATT TGGGCTGNTA TGGATGTTCC TAGNGAANAA CAATCTATTT 
    TGATCATTAA AGNTGTCGGA TATNTANAAA AGANAAA

AT2G01650.1

Model type
Protein coding
Short Description
plant UBX domain-containing protein 2
Curator Summary
encodes a peripheral membrane protein that contains UBX domain and interacts with AtCDC48 in vitro and co-fractionates with membrane-associated but not soluble AtCDC48 in vivo.
Computational Description
plant UBX domain-containing protein 2 (PUX2); CONTAINS InterPro DOMAIN/s: PUB domain (InterPro:IPR018997), UBX (InterPro:IPR001012), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein (TAIR:AT1G04850.1); Has 563 Blast hits to 563 proteins in 115 species: Archae - 0; Bacteria - 15; Metazoa - 269; Fungi - 22; Plants - 176; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink).
Link
InterPro Scan - TAIR