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15-0861-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19492854 [Map]; Strand: w
      • AT2G47500.1 - [+] show detail - P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calpon...
        Distance: -141; Region: promoter
    Flanking Genome Sequence: 15-0861-1 - 5-prime edge 
    CGGTAGAGGC TAACCGAAAA AGATTCTCGC GTGATCGTGA AAAAAGAATT 
    ATAAAGAATT ATAAGGTTTG GTTAGGGAGG GAAAAAAGAA ACGAAGCAAG 
    AGGTTCGGAA AGAATAGAGA GAAGGAGAAA GAGTGAAGAG GACAACAGAG 
    TATAAAGCAG TTATAGCTTT ACAACCTTGT ATTTGTGAGA CCATTCATGG 
    AGCTTATGAG TTCTCAACTT TTTTTCTTTT CTAATTAAAT CTCCTCATTA 
    CCTTTTTAAA ATCTATCCCC CCAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19492738 [Map]; Strand: w
      • AT2G47500.1 - [+] show detail - P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calpon...
        Distance: -257; Region: promoter
    Flanking Genome Sequence: 15-0861-1 - 3-prime edge 
    CTCTACCGTT TGGATTTTAT TAAAAACCTT ACTATTTATA TCTCTCTATT 
    TAAGTTTGTT ACCATTTACT ATTGTTGCTT ATATTGGATT ATATATCACT 
    CATCAATGAT ATTTGTTCCT AATATATTAT TACTAGATCT AGATGATACT 
    ACNTGATGTT TCATTATTAC TAGTATCATT TTTAATTGAA TCCAAGATCA 
    TTGTATACTT TTCTTGGAAA ATGGTCAGAT TTTCCGTTTC AATAAAACTT 
    AGTGGGATCG TGTTTTGTTT TATTATAGTA ACCATGGAAA TCGTAATGTG 
    ATTATTAATA CTAGTATTGT GAATTACTCC AAATTGTATT TTTTCTATAT 
    AATTATCTCA TTTGTATTTT CTATTAGTAT TAGTAATTGT TTTTCTCTTA 
    TATGTAAGAT TGTAAATATG AGACAAGAGG ATGTGTCATT AAAACATTCC 
    ACAAATCGAT GTAGCTAGTA GCACAGTAGT TGTGAATTAG TTGATTCCAT 
    GTGTCTTTGC AATGCTTTAN AAGCAAAGCT AAGAAAGAAA TTTTTTATAA 
    AAAGTGATAC TTTAGTATTG AGCGAAACAA CAATTAATTG CAATGATTTG 
    NTATTTTATA ATGGNGGTAT ATANAANAAA AATGTTAGGC GAGACATTCC 
    TTTCCAAATT ATCCCTTGAN AATATANAGT TANNTGAAAG TACTGCATTA 
    GGTCCNTACC CAANNACNAT NNATNCTCGN NNTTCCNANA AAACGNCCTT 
    NNTTATTGGG A

AT2G47500.1

Model type
Protein coding
Short Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Computational Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11938 Blast hits to 11443 proteins in 432 species: Archae - 0; Bacteria - 1; Metazoa - 5987; Fungi - 1397; Plants - 1883; Viruses - 0; Other Eukaryotes - 2670 (source: NCBI BLink).
Link
InterPro Scan - TAIR