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15-0909-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9162913 [Map]; Strand: w
      • AT1G26515.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: -3; Region: promoter
    Flanking Genome Sequence: 15-0909-1 - 5-prime edge 
    CNGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC GTCAGACGCT CTTGTTTCGA AACCCTAAAA 
    AAGGCTCTCC GTCTAGGCGT CTACTCTTTG CTTTGCTCTT TTCTAGCAAC 
    TAGTAAAACT ATATATATAT AACCAATGGG CNTTGTTGAG TCAGATTTTA 
    CAAGCCCAAG ATAAAGTCTC ATCAGAAGCC CACTTAAGTA AGTAGAGATT 
    TTGTGTCGAG AACATCAATA TATATATGAA ATTAATCCAC AAATCAGCTA 
    AATCTTGGTG ACAGTTTCTT TTCCTCTTTT ACATCTTTTG TTCAACAAAG 
    CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9162910 [Map]; Strand: w
      • AT1G26515.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0909-1 - 3-prime edge 
    ATNAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TCATGAAGAC ACGCAGCAAA AAGACCAAAA CCGAGAACAA TCAAGAAAAG 
    TCAAAAGAGA AAAACAAGTT TGATCAACTG CCTCTGGACC TAGAGATCGA 
    GATATTTAGG AGGTTGCCTT TGAAATCTGT AGCTAGGTTT CTCACACTAT 
    CCAAGTCATG TGCAGCAACT ATCCGCAGTC CAAGTTTCAT CACATCTTTC 
    CGGTCGCCGC AGCCTTGTAC CTTAATCGCT TCCGCTCCTA TATTCAACTG 
    TCTTCACCCC TTTAAACCTA GGGTACTGGT AGACCACAAG TTATCCTTCT 
    TCTCATCATC GTCTTCCTCA TCATCATCAA CGTCTTTTCT ATCGCGTTTG 
    ACATGTCCGT CGTCCCCATA CCCTCGTCAC ATGGAGTACT ATTGTCATTA 
    TGTAAATGGA TTGATAAGCT

AT1G26515.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT1G26510.1).
Link
InterPro Scan - TAIR