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15-0923-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7548109 [Map]; Strand: c
      • AT1G21530.2 - [+] show detail - AMP-dependent synthetase and ligase family protein
        Distance: -1173; Region: intergenic
      • AT1G21540.1 - [+] show detail - AMP-dependent synthetase and ligase family protein
        Distance: 505; Region: intergenic
    Flanking Genome Sequence: 15-0923-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TNNTNANACA AGTATATNTG GCNTTACGAA AGGCCCAGTA CTTATAGCTN 
    AAGGCCCAAT GCTTAGAGCT GANGANNCAC ATTGCANCAC CAACCGATAT 
    GTGCNTGCTA TATACTTCAT ATCTCTCTTA TGAGATCACN ANTNTTTTAG 
    AGAGAATGGT TGTATGAACA CAANCNACNA ATGANATCGG NANAATCTTA 
    GNCATTGACN ACGANGACGA AAATAANGAN GNTAANCANA TATGTCATGG 
    ACCATNTCAT AATCACTTGG ATCTTATTTA CCCTGGAGAT TTTCCTTTCT 
    TAGATC

AT1G21530.2

Model type
Protein coding
Short Description
AMP-dependent synthetase and ligase family protein
Computational Description
AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G21540.1); Has 77153 Blast hits to 70454 proteins in 3601 species: Archae - 1159; Bacteria - 50507; Metazoa - 3344; Fungi - 3637; Plants - 2272; Viruses - 1; Other Eukaryotes - 16233 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21540.1

Model type
Protein coding
Short Description
AMP-dependent synthetase and ligase family protein
Computational Description
AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G21530.2); Has 76629 Blast hits to 70171 proteins in 3593 species: Archae - 1132; Bacteria - 50179; Metazoa - 3309; Fungi - 3660; Plants - 2281; Viruses - 1; Other Eukaryotes - 16067 (source: NCBI BLink).
Link
InterPro Scan - TAIR