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15-0984-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30036505 [Map]; Strand: w
      • AT1G79840.2 - [+] show detail - HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START ...
        Distance: -451; Region: promoter
      • AT1G79840.1 - [+] show detail - HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START ...
        Distance: -910; Region: promoter
    Flanking Genome Sequence: 15-0984-1 - 3-prime edge 
    CTCTTATTAT GACTTGTGTA TTTATTTATT ACTATATACT ACTACTTATG 
    ATTTATGATT GTGATGATCT CTTCTTTCAA ACAATTGGTA ACTTATACAA 
    AACGCTATCA TCACATCTTA ATTAAAGATA TGGCTCAATA AGAAAGCCTA 
    TCTATTAATC ATATATACTT TATTATGTAA ACTTGGCTCT ATTAGTATAA 
    TTGCGTCAGG ATTATAGGAA ACTGGGACTC TGGGAGAAGC ATATATATAT 
    TTTTGATAAG AATTAGCATA TACAATATAT GGGTAAGAGA GAGTTACTAA 
    CAGTATATTG CAGCGCTACA TGGAACCCTA AATTGCTTGA GACTTGTCCT 
    CTTCCAATAT TTTAATAAAA ACTAATGGGA TATCTATATT CCTGGATTAA 
    TCCCAATCGA ATCTAATACA CTGACTAGTA TAGTAGGGGT ATGTACGTAG 
    CAGTATTAGG AAAACAATTA GACTAACGGT AAAGGCAGGA AAGAAGAGTT 
    GTTGAATATA AGTTAGAAAG TTAAAAAAGA ATT

AT1G79840.1

Model type
Protein coding
Short Description
HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain
Curator Summary
Glabra 2, a homeodomain protein affects epidermal cell identity including trichomes, root hairs, and seed coat. It also down-regulates seed oil content. Expressed in atrichoblasts and required to suppress root hair development. Also expressed abundantly during early seed development. Directly regulated by WER.
Computational Description
GLABRA 2 (GL2); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT4G21750.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G79840.2

Model type
Protein coding
Short Description
HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain
Curator Summary
Glabra 2, a homeodomain protein affects epidermal cell identity including trichomes, root hairs, and seed coat. It also down-regulates seed oil content. Expressed in atrichoblasts and required to suppress root hair development. Also expressed abundantly during early seed development. Directly regulated by WER.
Computational Description
GLABRA 2 (GL2); CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: protodermal factor 2 (TAIR:AT4G04890.1).
Link
InterPro Scan - TAIR