1. Home
  2. Mutant Lines
  3. 15-1053-1

15-1053-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7600714 [Map]; Strand: c
      • AT1G21650.1 - [+] show detail - Preprotein translocase SecA family protein
        Distance: -124; Region: promoter
      • AT1G21650.2 - [+] show detail - Preprotein translocase SecA family protein
        Distance: -75; Region: promoter
      • AT1G21650.3 - [+] show detail - Preprotein translocase SecA family protein
        Distance: 0; Region: intron6 (CDS)
    Flanking Genome Sequence: 15-1053-1 - 5-prime edge
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCACC GAACGGTATA GGGAGGCAAA ACAATTTGAG
    TGAAAAATAC GACAGAGAGC TTCTCAGTTC TCATCCATGG ATACTTGACC
    TCAACAACGA GAAAGTCACT ATAACGAAGC AATTTTTTTT GTAAAATGGG
    TTCTGTTTCT AATCTTGTGA GCCCTAATAT TTGCCATCCA GCTCCCCCTT
    GTCTCACATC TCGAAGTAAT AAGTTTCCGT GGACAAAACC AATATCTGGT
    CTTTTGTTCT ATCGGTCCGT CACGCCGATT AAGAGGTGTC ACCTTGTTCG
    AAGAAGCTGT GTCGTCTCAG CTTCCCTAAC GGTATGATAT GCGTCAACTC
    TCTTAGTAAT GTAATCGTAT AACTCTGTCT GTTCGTTGGC GCACACCAAC
    TGTTCGATCA TTTGTCTCGT CTCTATTTCC TGTGAATATT TTGTCTACTA
    ACGATTTTCT GTGCGATGCT TTTCTGAGAC TGGGATGAGA ATTTTATCTC
    TCAACATTCT CAGTGGTATT TTACTTCTCT TCATGTTTTA TTTATTTACT
    TTAGTTTCAT TCATATTTCA GGGGAATTTG GGTCGTTTGA AGANGAATGT
    CAAGATTTTC NANCNTGAAT ATTGGGTTGN CCGGACTACT ACCGNNTGGG
    GGAANTGNCA ATTCCTTGAA CCNANATTNA AGCCTTCCNN GAAANGGTAA
    ACTTANGGTN NNGN

AT1G21650.1

Model type
Protein coding
Short Description
Preprotein translocase SecA family protein
Curator Summary
Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality.
Computational Description
Preprotein translocase SecA family protein; FUNCTIONS IN: ATPase activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: intracellular protein transport, protein targeting, protein transport by the Sec complex, protein import; LOCATED IN: internal side of plasma membrane, chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecA, preprotein translocase (InterPro:IPR022491), SecA motor DEAD (InterPro:IPR014018), SecA Wing/Scaffold (InterPro:IPR011116), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA conserved site (InterPro:IPR020937), SecA DEAD-like (InterPro:IPR011115), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: Albino or Glassy Yellow 1 (TAIR:AT4G01800.1); Has 21976 Blast hits to 13078 proteins in 2820 species: Archae - 0; Bacteria - 13647; Metazoa - 53; Fungi - 1; Plants - 97; Viruses - 0; Other Eukaryotes - 8178 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21650.2

Model type
Protein coding
Short Description
Preprotein translocase SecA family protein
Curator Summary
Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality.
Computational Description
Preprotein translocase SecA family protein; FUNCTIONS IN: ATPase activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: intracellular protein transport, protein targeting, protein import, protein transport by the Sec complex; LOCATED IN: internal side of plasma membrane, chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecA Wing/Scaffold (InterPro:IPR011116), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA, preprotein translocase (InterPro:IPR022491), SecA DEAD-like (InterPro:IPR011115), SecA conserved site (InterPro:IPR020937), SecA motor DEAD (InterPro:IPR014018), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: Albino or Glassy Yellow 1 (TAIR:AT4G01800.1).
Link
InterPro Scan - TAIR

AT1G21650.3

Model type
Protein coding
Short Description
Preprotein translocase SecA family protein
Curator Summary
Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality.
Computational Description
Preprotein translocase SecA family protein; FUNCTIONS IN: ATPase activity, zinc ion binding, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: intracellular protein transport, protein targeting, protein transport by the Sec complex, protein import; LOCATED IN: internal side of plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), SecA, preprotein translocase (InterPro:IPR022491), WD40 repeat (InterPro:IPR001680), SecA motor DEAD (InterPro:IPR014018), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), SecA Wing/Scaffold (InterPro:IPR011116), WD40-repeat-containing domain (InterPro:IPR017986), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), SecA conserved site (InterPro:IPR020937), WD40 repeat, subgroup (InterPro:IPR019781), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G21651.1).
Link
InterPro Scan - TAIR