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15-1082-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5654855 [Map]; Strand: c
      • AT1G16530.1 - [+] show detail - ASYMMETRIC LEAVES 2-like 9
        Distance: -1972; Region: intergenic
      • AT1G16540.1 - [+] show detail - molybdenum cofactor sulfurase (LOS5) (ABA3)
        Distance: -4560; Region: intergenic
    Flanking Genome Sequence: 15-1082-1 - 5-prime edge 
    CTTGGATAAA ACTAACAAAA TCGGTTATAC GATAACGGTC GGTACGGGAT 
    TTTCCCATCC TACTTTCATT GCGATAGCGT GATCTCAGCC GACATCTTTA 
    CTCTCCGAAC ACAGTTCATG CACTAGGACA CATTACAAAT ACACACACAG 
    TCACACACAC ACACATATAT ATATATTCAT GCATAAGCAC TCGTGTATAT 
    ATGCNTTCTT TGATTCCTTT GCTTNCATGC TCAACGTGTN TACTAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7554787 [Map]; Strand: w
      • AT1G21550.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: -911; Region: promoter
      • AT1G21560.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
      • AT1G21560.3 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
      • AT1G21560.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -53; Region: promoter
    Flanking Genome Sequence: 15-1082-1 - 3-prime edge 
    GCCGTAGCTC ACATTCCGAC TCACTGTACT ACTGTAGAGA CATTGACAGT 
    TAGTTACTAC AGTCATAAGA GAGCTTTTGT GTTTTGTCAT AATTGATTAT 
    TTCATTTCAG GCCCATAAAT AATAAGGCCC AACNTTTGTA AATTGGGCTC 
    AGGCNTTTTG TTCATTATTT TTGTATAAAT AGTTAAATGA AAAAATTATG 
    GTAGGAAATA GGATTTGGTT GGAGATGCAA AGACAATGCT ATAATTTTCC 
    TCTTATTTAT CTAATCCACA TGAAAACTAT AAGCGTTATC GTTTTGCTTT 
    TGCTGTTCAC AGGGAAAAAT CCACTGGAAA ATTGTGGATG GGCATGTATG 
    TGGATGTGGC CGGTGATAAA TATCTACTAA ATGGGGACCG TACGACTTAG 
    CCACGGAACT CGAGAACGTT ACCGAACATT CCATATGTCA AACTAAGATT 
    ATGATGACAC CACTCTACTA CATAGAGTAT TAGAATCTAC TGTTTTTTAA 
    CTTTTTTTTT CCATAGCACA TTAATACTAT TTATCTATCA AAATACAAGG 
    TNTAATAATA TAGTTTANAA AGCT

AT1G16530.1

Model type
Protein coding
Short Description
ASYMMETRIC LEAVES 2-like 9
Computational Description
ASYMMETRIC LEAVES 2-like 9 (ASL9); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT2G30130.1); Has 986 Blast hits to 981 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 986; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G16540.1

Model type
Protein coding
Short Description
molybdenum cofactor sulfurase (LOS5) (ABA3)
Curator Summary
Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. Also involved in protein import into chloroplasts.
Computational Description
ABA DEFICIENT 3 (ABA3); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), MOSC, N-terminal beta barrel (InterPro:IPR005303), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT1G30910.1); Has 7940 Blast hits to 7904 proteins in 1914 species: Archae - 94; Bacteria - 5396; Metazoa - 390; Fungi - 394; Plants - 292; Viruses - 1; Other Eukaryotes - 1373 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21550.1

Model type
Protein coding
Short Description
Calcium-binding EF-hand family protein
Computational Description
Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 42 (TAIR:AT4G20780.1); Has 8971 Blast hits to 8616 proteins in 1133 species: Archae - 0; Bacteria - 20; Metazoa - 2955; Fungi - 1509; Plants - 3114; Viruses - 0; Other Eukaryotes - 1373 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21560.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01170.1); Has 76 Blast hits to 76 proteins in 15 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 2; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21560.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01170.1).
Link
InterPro Scan - TAIR

AT1G21560.3

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01170.1).
Link
InterPro Scan - TAIR