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Mutant Lines
15-1095-1

15-1095-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 7421292 [Map]; Strand: c
- AT1G21190.1 - [+] show detail - Small nuclear ribonucleoprotein family protein
  Distance: -389; Region: promoter
- AT1G21200.1 - [+] show detail - sequence-specific DNA binding transcription factors
  Distance: 0; Region: intron1 (5UTR)

AAAAAANAAA NAAATNAAAN TNAAAATTNN NCCNNCNNCN CTTNNNTGNN 
CNNGGGNCCT GGTAAAANTA ACAAATNCGG TTATACGATA ACGGNCGGTA 
CGGGATTTTC CCATCCTACT TTCATCACCT CAGGTTTCTN TTCTCTCTCT 
GTATATGACA AAAGGCTTTT TGATTAAAAC AACCAATATA AAGATTATAN 
TANATNNAGT GTNATGAAAT GACCAATTGA TACCTTGTGA TTGNACTTAA 
TATANTNAAG TNCCANTANC CATGATTGAT NTNCATTAGA TNATTTATNA 
TCTNCGTAAT ANTTTNCCNA AANANNCCAN NACCCNANAN CNTTTNTGNC 
NCCATNNTNA ATCNTCNNNA NNNNNANACN CNNAGNCNNC NGNTNGAACC 
CGNNTNANAN GGNTAANTAC GACCNTCNAN NGNNNGGATT TNNCNTGCCN 
CNNNNNNNAG NGGGNCCNNC NNGNNCCNNN TGTNCCNGNG NNCNGNCACN 
AANCAGNTGT NATNCACGAA ANNAATGNTN GGNGNNNTAA NNACCCACCA 
CNNCNGGANG GNNNNNAANC NAANTCANGC GAANNCCNCT TNCCCCCNAT 
AGANNTANAT NNCCNNGGCN ANNNTGCNCC CCCTATNNNN TTNCATANTN 
ATTCCAGCAC CNNGNTCNGN NGTTNNCCNN NCCCNNCACG NCCCTANNTG 
CNNNGANGCA CANACCCANN NGANGNGGNA NANNGANTAC NCNCCNCNNN 
NNCANNNNAN CNNACANCNN CCNTCNACCA NCATGCATGA NCANCCCACA 
TNCACANCNC ANNTNNGNGG TNNCNCCNAG TGTCGANANA NNNCCCTNCC 
ACNTNAACGN CCNNCANGTN NCANNAAGCG NNTNACNCGA ANNNANACCC 
NTNNCANCCN GNNNNCATCN TNT

3 prime edge [+] show sequence

Chromosome: 1; Position: 7421230 [Map]; Strand: c
- AT1G21190.1 - [+] show detail - Small nuclear ribonucleoprotein family protein
  Distance: -327; Region: promoter
- AT1G21200.1 - [+] show detail - sequence-specific DNA binding transcription factors
  Distance: 0; Region: exon1 (5UTR)

ATNAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGT 
GACCTGAGGA AGCTGACCGG AGAAGACGAA AGCAAACTTT TTTCTGTGAG 
TTTTACTTCC TTTGACTCAT CTCTCATATA TTTACCGCTT TATTTTCTTC 
ATCCCGATTC CTCTCTGCTT CATTCTCTCC TAAAGTTTCG ATCTTTAATA 
TTCCCCTAAG ATCCAGTACT AATTTTGTTG ACAAAGGTTT TGACTTTTTG 
AGATCTGTTT TCTCTTCGAT TTCTCTGATG AATTAGGAAG AAATTTGATC 
CAAAAATGGA TGGGAATTTT CCACAAGGAG GTGTAGTTCG TAGTGGAGCT 
TCATCTTATG GAGGATTTGA TTTACAAGGT TCTATGAGAG TTCATCACCA 
AGACTCCATG AATCAGCAGC ATCGACACAA TCCTAATTCT AGACCACTTC 
ATGAAGGTCT TCCCTTTACT ATGGTTACAG GTCAAACCTG TGATCATCAT 
CAGAATCAGA ACATGTCTAT GTCTGAGCAA CAGAAAGCTG AAAGAGAGAA 
GAATT

AT1G21190.1

Model type: Protein coding
Short Description: Small nuclear ribonucleoprotein family protein
Computational Description: Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT1G76860.1); Has 1267 Blast hits to 1267 proteins in 306 species: Archae - 319; Bacteria - 0; Metazoa - 370; Fungi - 215; Plants - 174; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G21200.1

Model type: Protein coding
Short Description: sequence-specific DNA binding transcription factors
Computational Description: sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 317 Blast hits to 297 proteins in 56 species: Archae - 2; Bacteria - 28; Metazoa - 67; Fungi - 2; Plants - 135; Viruses - 9; Other Eukaryotes - 74 (source: NCBI BLink).
Link: InterPro Scan - TAIR