1. Home
  2. Mutant Lines
  3. 15-1148-1

15-1148-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5157170 [Map]; Strand: c
      • AT5G15802.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron1 (CDS)
      • AT5G15805.1 - [+] show detail - pre-tRNA
        Distance: -469; Region: promoter
      • AT5G15810.1 - [+] show detail - N2,N2-dimethylguanosine tRNA methyltransferase
        Distance: -628; Region: promoter
    Flanking Genome Sequence: 15-1148-1 - 5-prime edge 
    GTAGTAGCTG CTTAGAATTG CAATGAGCTG CTTGATTTTA ATCCAAGAGG 
    GTTTGATTTA AACTATTTTT CATCCTTAAG AGTTTCTTTG TGATCTGTAG 
    TTTGGAAGGA TAGATTCTGA ATGAAAAAAA AAATCCATTG TTGAGTTATG 
    TTTTTAGTTT CAATCTCCAA NGGATTACAT TTTTTTTCTG AGTTCACNCC 
    ATGTGAAAGT AANGGTTTTC CTGAAATTCT GTNTTCCTCA CTGAAANATC

AT5G15802.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35 Blast hits to 35 proteins in 15 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G15805.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Ile (anticodon: AAT)
Link
InterPro Scan - TAIR

AT5G15810.1

Model type
Protein coding
Short Description
N2,N2-dimethylguanosine tRNA methyltransferase
Computational Description
N2,N2-dimethylguanosine tRNA methyltransferase; FUNCTIONS IN: RNA binding, tRNA (guanine-N2-)-methyltransferase activity; INVOLVED IN: tRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N2,N2-dimethylguanosine tRNA methyltransferase (InterPro:IPR002905); BEST Arabidopsis thaliana protein match is: N2,N2-dimethylguanosine tRNA methyltransferase (TAIR:AT3G02320.1); Has 1017 Blast hits to 963 proteins in 359 species: Archae - 255; Bacteria - 70; Metazoa - 198; Fungi - 150; Plants - 103; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink).
Link
InterPro Scan - TAIR