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15-1168-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)
    (Seed yield::sterile)
gynoecium (PO:0009062)
  • abnormal (PATO:0000460)
    (Flowers::carpel)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 344410 [Map]; Strand: c
      • AT2G01800.2 - [+] show detail - COP1-interacting protein-related
        Distance: 0; Region: exon4 (CDS)
      • AT2G01800.1 - [+] show detail - COP1-interacting protein-related
        Distance: 0; Region: exon4 (CDS)
      • AT2G01800.3 - [+] show detail - COP1-interacting protein-related
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 15-1168-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATATT 
    GTCCCTGAAA GATCAAGCTN GGCCTCAACA TCAATGGTAT GACCATCGAC 
    AGGATCAAGC TTGACCTCAA CATCAATGGT ATGACCATTG ACAGGTCCCT 
    CTTGATCTGC ATCACAAATA TGCTGATTCT CTCCCATCTT AGTGACATTT 
    CCCTCACCAC TTTCAAGGCC TTAAGAAAAA CAGATATAAC AACACAACGG 
    TAAATAAACT GATACTCTTC AATAACATGA TATAGACTAT TCAATAACAG 
    AGGTTACCTT TTGCTTCTGT TGGAGTCTCT ATGGAGGGTT TCTTTATACT 
    TTTGTTGTCA CTTTTCGATT TTCTCTTTCT TGCTTTCTTC TCAACAACTT 
    CACCAATCTG CAGCTCACCT TTCTCCTCGA CACGTACTAG GTCGA

AT2G01800.1

Model type
Protein coding
Short Description
COP1-interacting protein-related
Computational Description
COP1-interacting protein-related; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT4G00580.1); Has 777 Blast hits to 692 proteins in 155 species: Archae - 4; Bacteria - 61; Metazoa - 249; Fungi - 76; Plants - 111; Viruses - 5; Other Eukaryotes - 271 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01800.2

Model type
Protein coding
Short Description
COP1-interacting protein-related
Computational Description
COP1-interacting protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT4G00580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01800.3

Model type
Protein coding
Short Description
COP1-interacting protein-related
Computational Description
COP1-interacting protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT4G00580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR