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15-1207-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7610471 [Map]; Strand: w
      • AT1G21670.1 - [+] show detail - LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structure...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1207-1 - 5-prime edge
    GAGTCCACCA TGAAACTCAC AAACGCTCTC TTCTTCTTCC TCCTCATCTG 
    TCTCCTCTCT TTATCATCAG TTTCATCGAA CAAGTCTCAG CTTTCAAATG
    GCTCGACCAT CTTATTCACG ACGATAGGGA GACCCACTTT CGAATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7610355 [Map]; Strand: w
      • AT1G21670.1 - [+] show detail - LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structure...
        Distance: -43; Region: promoter
    Flanking Genome Sequence: 15-1207-1 - 3-prime edge
    GTGGACTCTT GTTTTGGGAC TTGATGAATG GCGTGAGCGT TTTATAGATG 
    GAACTGATGA CGTGGATGAA TTTGACAAAT TTGGTTGACT TTAGTGGTTC
    TGGATTTTAA CCATTTCGGG AAGCT

AT1G21670.1

Model type
Protein coding
Computational Description
LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller (InterPro:IPR011659), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: DPP6 N-terminal domain-like protein (TAIR:AT1G21680.1); Has 8461 Blast hits to 5060 proteins in 1257 species: Archae - 79; Bacteria - 5567; Metazoa - 37; Fungi - 70; Plants - 117; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink).
Link
InterPro Scan - TAIR