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15-1235-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4099956 [Map]; Strand: c
      • AT3G12890.1 - [+] show detail - activator of spomin::LUC2
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 15-1235-1 - 3-prime edge 
    TGTGTGTCGT AAAACCCTAG CCGACAGGCG TGTTCGTGTT CGCGGCCGAT 
    TTGCTAGAAA CAATGACACA TGTGAAGAAC AACCTCACAT GTCTAAGAAT 
    CACAACAACC ATTCTGAAAA AGAGGAAGAT ATGTTTTCAG GATCAGACGA 
    CTATCTAATC CAGGTATTTA TTTAATTATT CCAAGACACT AGTATATTAT 
    TATATGCCAT CATTACTTGT AATTTGTAAA TCTAATTAAC CAATGCATCC 
    CAATTTAAAG CAGATGGAAC ACGATGACGG ATGGCTTCAC GAAGCAATGT 
    CCAATCTGAT TCCTTTTCCT TGTGAATTTG ACGCTCCTGG AGATGCTCAT 
    CATCCAACCA ATTGGAGCTT CTGATGTCAC TACCTATCTC ATTTACTTCC 
    GAATCAATTA ATGTCTCTAG ATATTAAGTT TCATCAGTTA GTTTAGTTTT 
    ACTAAGCAGC TTATTTATTT TATGGTAGAT TTATCATATT GTACTTAATT 
    GTTCTTGGGG TTATTGAACA TGAAGATTCT GTCTAGTGAA TAAATAAAAG 
    AACTTTACGT ACTTATAATC ATCATATCTA ATTATGACGT GAGGATAATT 
    TCAGCCAATG CAGGCAATCT CAATACAAGA GCAAGTTTTT ATGGTTTTTG 
    GATTTTTGTG TTCTTCAAAA AAAAAAAGTN ACGTGAATCA CTTTACCTTT 
    TTNNAGNAAA TNAAAGT

AT3G12890.1

Model type
Protein coding
Short Description
activator of spomin::LUC2
Curator Summary
Encodes a protein belonging to a class of CCT (CONSTANS, CONSTANS-like, TOC1) domain proteins. The protein contains a 43 amino acid-long sequence with high homology to the CCT domain but does not have any B-box or GATA-type zinc finger domains. Functions as a transcriptional activator and regulates the expression of at least a subset of sugar-inducible genes.
Computational Description
activator of spomin::LUC2 (ASML2); CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G41380.1); Has 1405 Blast hits to 1405 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1344; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).
Link
InterPro Scan - TAIR