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15-1294-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6789545 [Map]; Strand: c
      • AT1G19640.1 - [+] show detail - jasmonic acid carboxyl methyltransferase
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 15-1294-1 - 3-prime edge 
    CGCAGCATAG TAAGGAGCTG TTGAAAGCAT CGATCTTCTC TTCCTCGATG 
    ATACCCTTAA GATGGAGAAA AATAAACGCG GCACCTTTTA GTTATGACTT 
    ACTGAGGATT TCTTCTAGGT TTTTTTTTTT TTTTTTTAAA NNNNNGNNCC 
    NAAAANTNNN NNANTTTNGG GGGNAAANNC CAAAAANNAA NNNTTNTTTN 
    NNNANANNNT TTTTNNNAAA AAAANNNNNG AAAAAAANNA NNAGGGGNTT 
    AANNNNAAAA NNNGGGCCNN AANNNTNGGG GTNNAAAAAN NTTNNGNGAA 
    AAAAAAAAAA AAAAAAANTT TTTTTTTNAA AAANAAAAAA ANNTTTTTNA 
    NNNCCCNAAA NNTTTTTNNC TTTTTNNNAA NNNNNNGGGG GGGNAAAGNN 
    TTTNCNNCCC NNCCNNNNTT TTTTTTNAAA AAAAAAANCN GGGNANNNAA 
    AAAAAAAANT NNNTTTTNAA ANANNNNNCN TTTTTTCCCC AAANNCNNNN 
    NNGNGGGNGN AANTTTTNNN NANAAATNTN GNNTNTTTTG GGCCCCNAAA 
    AAAANTTTTT NGGGGGNNTN AAAAAANNTT TTNNNTANAA AAAAANTTTN 
    NGGNCNCNNC NNNAANNNNN NGAAAAAACN CNNAAAANTT NNGNAAAAAA 
    AAAGGGGGNN CGNNTNANNN NNGNAAAATN TGGGNNNANN NNGNNNCGGG 
    GGGAANGCTC NTNAAANAN

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6789429 [Map]; Strand: c
      • AT1G19640.1 - [+] show detail - jasmonic acid carboxyl methyltransferase
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 15-1294-1 - 5-prime edge 
    ATGCTGCGAG CTCCGAAGAG TTGAAAATGG TGATAGAGAA AGAAGGGTCA 
    TTTTCGATCG ATAGGCTTGA GATAAGTCCG ATTGATTGGG AAGGTGGGAG 
    TATCAGTGAG GAGAGTTATG ACCTTGTAAT AAGGTCCAAA CCCGAAGCCC 
    TAGCTAGTGG CCGAAGAGTG TCTAATACCA TAAGAGCTGT GGTCGAGCCG 
    ATGCTAGAAC CTACTTTCGG TGAAAATGTG ATGGACGAGC TTTTTGAAAG 
    GTATGCAAAG ATCGTGGGAG AGTACTTCTA TGTAAGCTCG CCACGATACG 
    CTATTGTTAT TCTTTCGCTC GTTAGAGCCG GTTGATCGTG TTATAACATA 
    TGCCAATATA CATGTCTTTG GGCCTACAAT GACATGATTT GGTAGTTTTC 
    TAATCAAGCA TATGTAATAT AATTTGCTNC GAGAATAAAA TAATAAAATA 
    AAGTCTGATG TTACGGTNGA CCCTTTTTTT TTTTTTTTTT NTTTNNGNGG 
    GGGGCNCNNT NTTTATTAAA AAAAANAAAA NAGNGGGTGT NGCGGCCCNT 
    TNGANGANAN ANNTNNGGGG NNNGNGNGNC NTTTNNNTNN ANATTTTTNA 
    NNNAANGTNA NCNNGTNNGN CANNNCCNAC GAGNTCTNTT NTTNGGNNNT 
    TCNNTTTGNN AGGNGCCNTT TTNGGGCNNN TNNNTCNNGA ANNAGNAAAA 
    AAA

AT1G19640.1

Model type
Protein coding
Short Description
jasmonic acid carboxyl methyltransferase
Curator Summary
Encodes a S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase that catalyzes the formation of methyljasmonate from jasmonic acid. Its expression is induced in response to wounding or methyljasmonate treatment.
Computational Description
jasmonic acid carboxyl methyltransferase (JMT); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 890 Blast hits to 871 proteins in 121 species: Archae - 0; Bacteria - 61; Metazoa - 9; Fungi - 5; Plants - 740; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Link
InterPro Scan - TAIR