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15-1297-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27433565 [Map]; Strand: c
      • AT1G72900.1 - [+] show detail - Toll-Interleukin-Resistance (TIR) domain-containing protein
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: 15-1297-1 - 5-prime edge 
    ACTTTGACTC AAGGGATCTA ACTTATTAAA CTGATTCCAA CACTTTCTCA 
    TAACCAGATC TTCTACTTTG AGAGCTAAAA CATTCCGTGG CAAAATTCAT 
    TGCTTTATAT ATACAAAGCC CACTCGAACG CAGCAGAAAT GTCGTCTCTC 
    TTTTTAAAGG CCAATGATCG GAAGCTACGA CAAAATTTCT GGAATGTCAA 
    AAACTCAGCT TCGTAGACAA GCTGTATACC ATAAGAAATC AACAACTGCT 
    TATCTTTTGT AGTGATGATA ACAACACTCC CCGGACCAAA ACCGTTGAAA 
    TCCCCTGCAA GAGCATCTAA CTGTTCAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27433689 [Map]; Strand: c
      • AT1G72900.1 - [+] show detail - Toll-Interleukin-Resistance (TIR) domain-containing protein
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: 15-1297-1 - 3-prime edge 
    GTCAAAGTTA ACTAAACTTA ATAAGTTGTG TGGCTTTCAA ATAAGATTGT 
    TTTGTCTATT TTTGGAGTGG GTTCTCTTGG GGTGTATAAA AATGTCACTC 
    TTCATTGGAT TAAATAATAT ACATTTTTTT TTGTTATAAA TCAAATTTGN 
    GTATTTTAGT TATAACCTAA ATGTTGTATG TCTCTTTCTA NACTTAANAA 
    CTAAAGTCTA TGATTCCTTA AAAACAAAGT TTGTATAATT TTTTTGGGAT 
    TCCCATGACC ATTTGTTCTT TGAATACCTG AATT

AT1G72900.1

Model type
Protein coding
Short Description
Toll-Interleukin-Resistance (TIR) domain-containing protein
Computational Description
Toll-Interleukin-Resistance (TIR) domain-containing protein; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain-containing protein (TAIR:AT1G72940.1); Has 4486 Blast hits to 4351 proteins in 152 species: Archae - 0; Bacteria - 27; Metazoa - 4; Fungi - 0; Plants - 4454; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR