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15-1343-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3814862 [Map]; Strand: w
      • AT1G11340.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 15-1343-1 - 5-prime edge 
    CTAGCCATGC CGAAATCTGA AATCTTTGGG ATCATTTCAC TGTCAAGAAG 
    TATATTGCTG GCCTTGAGAT CTCTGTGGAT GATTCTCAGT CTTGAATCTT 
    GATGAAGATA TAAGATTCCA CNGAGCAATC CCTCGGACTA TCTCCATTCT 
    TTTTGGCCAA TCCAACTCTG CTCTCTGCTC TTCATCTAGC ATGATGATAA 
    GAAGAAAGAA ACAAGAAAAT TCAGAGTCAT TGATCTTCCT GAAAGGGAGA 
    ATTTGAACCT GAGTTAAAAA TGTTGAACGT ACGGAATATG AAATAGTCTA 
    GGCTCTTGTT TGGTAAATAC TCGTATACCA ACATCTTCTC TTCCAATTCA 
    ACGCAACATC CTAAGATCCT CACGAGATTT CGATGCTGCA ACTTTGATAT 
    CAGCTTGACC TCGTTCTTGA ACTCTTCCAT TCCTTGTCCC GAGTTTCTCG 
    ACAACCTCTT CACCGCTATC TCCATACGGT TTTGTAACAC GCCCTAAGTA 
    GAAACAAAGG AAACAATATT CCTTACTACT TATTGAACTT AATAGTGTTC 
    TCTCTTGGAG GAGTATTGAT GAAAAATGGA TATTGCCTCT TCATTACCTT 
    ATAAACAGGT CCGAAACCAC CTGCTCCAAG CT

AT1G11340.1

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), EGF-like, type 3 (InterPro:IPR000742), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11410.1); Has 123060 Blast hits to 121063 proteins in 4656 species: Archae - 122; Bacteria - 13729; Metazoa - 45275; Fungi - 10148; Plants - 35343; Viruses - 433; Other Eukaryotes - 18010 (source: NCBI BLink).
Link
InterPro Scan - TAIR