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15-1349-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7545921 [Map]; Strand: w
      • AT1G21530.1 - [+] show detail - AMP-dependent synthetase and ligase family protein
        Distance: 0; Region: intron1 (CDS)
      • AT1G21530.2 - [+] show detail - AMP-dependent synthetase and ligase family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-1349-1 - 5-prime edge 
    CTCCGCTCGG GAGATAATGG TTGCTGGTGG GGGAGCTCCA GAGGTCATAA 
    CCTGATTCAA AGTTCATAAA ACCGAAACAG AGAGAAATGT TCATTCATAA 
    CGCTTTCAAT CACAAAAAAT CTCAAAGTAA AGCT

AT1G21530.1

Model type
Protein coding
Short Description
AMP-dependent synthetase and ligase family protein
Computational Description
AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G21540.1); Has 77218 Blast hits to 70321 proteins in 3603 species: Archae - 1163; Bacteria - 50491; Metazoa - 3382; Fungi - 3676; Plants - 2327; Viruses - 1; Other Eukaryotes - 16178 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21530.2

Model type
Protein coding
Short Description
AMP-dependent synthetase and ligase family protein
Computational Description
AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G21540.1); Has 77153 Blast hits to 70454 proteins in 3601 species: Archae - 1159; Bacteria - 50507; Metazoa - 3344; Fungi - 3637; Plants - 2272; Viruses - 1; Other Eukaryotes - 16233 (source: NCBI BLink).
Link
InterPro Scan - TAIR