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Mutant Lines
15-1445-1

15-1445-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 24855226 [Map]; Strand: w
- AT1G66620.1 - [+] show detail - Protein with RING/U-box and TRAF-like domains
  Distance: -1073; Region: intergenic
- AT1G66630.1 - [+] show detail - Protein with RING/U-box and TRAF-like domains
  Distance: 60; Region: intergenic

NGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCGG TTAGAGAAAG AAACAACATT GTCATCGGAA 
AAAAAAGAAA AAGAGAGAAA GAAACAACAT TAAGTAAACG ATAAGCAATA 
TTTAAAATAT GAGTTTAGCT TTCATAGATG AAAGCAGCGT ACAACAACAA 
CAACAACAAA AGACAAACAT CATTTAATAC ATTACTAGGC CACTGATGTA 
TGAACCTAAT AACCTACTAC AAGAGATATG ATATGATAAT TACACCTCTT 
CATCATCATC ATCAGCTTCT TATACTTCTT CTCCTGATCG GCGAATGCAA 
ATTTGCATCT TCAATATAGA GGCTTCATCA AGTAAATAGT AAGGAATCGA 
CATGAAATTA GAGGCTTCAC CACGTAAATA GTAAGGAATC GGCTTGTAAT 
TCGCCACATG ATTTTCAGCG CTTACTTTTT GAATCTTATT CATCTTCTTG 
GATTCAAACG TAATCTTTTC ACTTCCGTTC CGGTAGATGA GATGGCAAGA 
GAATT

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 24855220 [Map]; Strand: w
  - AT1G66620.1 - [+] show detail - Protein with RING/U-box and TRAF-like domains
    Distance: -1067; Region: intergenic
  - AT1G66630.1 - [+] show detail - Protein with RING/U-box and TRAF-like domains
    Distance: 66; Region: intergenic
Flanking Genome Sequence: 15-1445-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
ATTGATTACA CTTATACGTC TTTGAATTTA GTCCTCCAAA ATGTAATTTT 
AATTTCTATA TATTGTTGAT AGAACT
```

AT1G66620.1

Model type: Protein coding
Short Description: Protein with RING/U-box and TRAF-like domains
Computational Description: Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, SIAH-type (InterPro:IPR013010), Zinc finger, RING-type (InterPro:IPR001841), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT1G66630.1); Has 28753 Blast hits to 7463 proteins in 934 species: Archae - 15; Bacteria - 1358; Metazoa - 12473; Fungi - 3158; Plants - 1935; Viruses - 817; Other Eukaryotes - 8997 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G66630.1

Model type: Protein coding
Short Description: Protein with RING/U-box and TRAF-like domains
Computational Description: Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Zinc finger, SIAH-type (InterPro:IPR013010), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, RING-type (InterPro:IPR001841), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT1G66620.1); Has 1705 Blast hits to 1696 proteins in 709 species: Archae - 0; Bacteria - 0; Metazoa - 1145; Fungi - 28; Plants - 467; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
Link: InterPro Scan - TAIR