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15-1462-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 374473 [Map]; Strand: c
      • AT4G00890.1 - [+] show detail - proline-rich family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1462-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAG CTACGATAAT CGTCTCTGAA ATCACCAATT 
    CCTTCTCCAG CTACGATCAC CGCACCAGCG CCGCCGTTTT CTTCACCACT 
    CTCCCAAACT ACACCGTCAC CTAAACCATC GTTACCCCAA ATTGAACCAA 
    ACCAAATCAA ATCTCCTTCT CCAAAACTCA CAAACACCGA ATCTCACGCT 
    TCACCAGAGC AGAATCTAGT GAAACCTGAC GCCAACCTCA TGAACAAGAT 
    TCCGGCTAAA AACGAAGTTC CGAAAAACAG GGGAACATTA GAGAAAAAAA 
    CAGAGCCAAT GATTATGATG TTCATAAACA GTAACGTCCA AGGATTCAAC 
    ACTTCTCTTT CGCTTGATTC ATCTTCCATC GATCATAAAC CAGGCGTCCA 
    CTTGACGATC GATTATGATC AAAGTTGTGA TTTTTCTTAA CCACTGTTTT 
    AAATAATTGC ACATATTGTA ATACAATCGT CTCTTCGTAT CACTATTATA 
    TATGATCAAC GTTGNGATTT TTCTTCAATT CTGTTCCCGG NNTTAAACTA 
    CTTAAGNNGG NGCTGGAAAA TAAAGCNCNA AAGGGGCCNA AANTNNNNTN 
    NNNATATNAA NATTANAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 374477 [Map]; Strand: c
      • AT4G00890.1 - [+] show detail - proline-rich family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1462-1 - 3-prime edge 
    ATTAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTGTGCCGTC GGAGATGGTG GTGGCATAGG TGATTTAGAT TGGTGGTTTT 
    CACTAGCTTT CGGCGACAAC AGTGGCGGTG GTGATGGTGA TGAGTGTGTC 
    TGAGATCTTG CTTGTTTATC AGATTTTGGT GGCGAAATCG GCNGGTGATT 
    GGGACCTTGT TTCATTTTCA TCAATGGATT TAGACGGCAA AGGAGGTGGA 
    GACGATGCTT GCGACATAAG CGGTGATCGG AGCCGAGTTT CGTCTATGGA 
    TTTAGACGGC AAAAGCGGTG GTTTCGGTTG GGACTCGAAT T

AT4G00890.1

Model type
Protein coding
Short Description
proline-rich family protein
Curator Summary
Encodes a putative glycosyl hydrolase family 10 protein (xylanase).
Computational Description
proline-rich family protein; Has 74402 Blast hits to 44432 proteins in 1604 species: Archae - 100; Bacteria - 7075; Metazoa - 32308; Fungi - 16616; Plants - 5983; Viruses - 2030; Other Eukaryotes - 10290 (source: NCBI BLink).
Link
InterPro Scan - TAIR