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15-1586-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7549336 [Map]; Strand: w
      • AT1G21540.1 - [+] show detail - AMP-dependent synthetase and ligase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-1586-1 - 5-prime edge 
    CTTCCCGGTT CTCGGGTCCC TAACATCAAC TTCCGCGAAT CCGATGGTTC 
    TTACTCCTTG TCTTGATTTC AGTCTTGCTC TTTCCAATGG ATCAAGATGA 
    TCCCACTCAG CCTTCCAAGC ACATGACACA ACCGGGCCTC CGGTTTCCGT 
    TAAACCGTAC CCATGACCGA CGTTGAAACC TAGGGTTTCT GCTCTTGAGA 
    TGATGGCTGC TGGAGGTGGA GCTCCGGCGG TCATAACCTG ATTTCAGAAA 
    CACAAAACAG AGTTTATTCA AAAGTTCACC AAATGATTTT CAAATGGAAG 
    TTTTTAATAA ACCAAACCGG TATTGAACAT GGATGTATTT AATAATACCT 
    GAACCGGGTT CTTTAGCGGT TTACGAGACG GGTAGTTGGT TAACATGTTG 
    AGAACCATTG GTGCGGCACA CATGTGAGTT ACCGTGATGC TTATCGATCA 
    AGTCATAGAT AGTCGGCGCG TCGACTCTAC GGGTGCAGAC GTTGGTGGCT 
    CCAACCGCCG CAGTGCCCCA TGTATACCCC CAACCATTGG CGTGGAACAT 
    TGGTAGAGTC CACAAGTAAA CCGGCCTGTT CGGAAAATGC CAGTCAAGCA 
    ATGAGCTTAC GGTTAGCATG AAAATTGCTC TGTGGCTCAA CACTACTCCT 
    TTGGGAGATG ACGTTGTTCC ANAAGTNTAG TTGGANAATC ATAGGCTGCC 
    ACTCGGTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7549220 [Map]; Strand: w
      • AT1G21540.1 - [+] show detail - AMP-dependent synthetase and ligase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-1586-1 - 3-prime edge 
    CCGGGAAGAG TGTGGAACAC GACGGTGTTT CCGTTGGAGA GATCGTTTTA 
    AAAGGCGGTT CGGTTATGCT TGGTTACTAC AAAGACCCTG AAGGAACCGC 
    AGCGTGTATG AGAGAGGACG GATGGTTCTA CAGCNGGAGA CGTAGGAGTT 
    ATACATGAAG ACGGTTACTT GGAAGTTAAA GACCGGTCAA AGGATGTGAT 
    CATATGCGGA GGAGAGAACA TAAGTAGTGC CGAGGTTGAG ACGGTTCTGT 
    ATACAAATCC AGTAGTTAAA GAAGCCGCGG TGGTGGCTAA ACCGGATAAG 
    ATGTGGGGAG AGACACCGTG TGCTTTTGTG AGCTTGAAGT ATGATAGTAA 
    TGGTAATGGG TTGGTGACTG AGAGGGAAAT AAGGGAGTTT TGTAAGACGA 
    GGTTACCTAA GTATATGGTT CCAAGGAAAG TAATTTTTCA GGAGGAGCTT 
    CCAAAGACTT CTACTGGAAA GATACAGAAG TTTCTTCTAA GACAAATGGC 
    TAAGTCTCTG CCTTAAAGAT TCGCTTGAGT TATTGAGGAT ATGAAGAAGA 
    ATCTCCAAGA ATGAAGTAAA GAATGACATT TATTTTGTGT TGTATTATTG 
    TTTTACCCTT AAGAAGGGAT TAGTTTCCAA ACAAGCT

AT1G21540.1

Model type
Protein coding
Short Description
AMP-dependent synthetase and ligase family protein
Computational Description
AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G21530.2); Has 76629 Blast hits to 70171 proteins in 3593 species: Archae - 1132; Bacteria - 50179; Metazoa - 3309; Fungi - 3660; Plants - 2281; Viruses - 1; Other Eukaryotes - 16067 (source: NCBI BLink).
Link
InterPro Scan - TAIR