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15-1605-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7654431 [Map]; Strand: w
      • AT1G21790.1 - [+] show detail - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1605-1 - 5-prime edge 
    GAAAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCCCTAC TTCTTTGGCT TGTCTCCGTC GTGTTTGAGA 
    TTGCTTTCAA TCTCCGGACG GAGCTTCTCT GGGTGATTTG CGGTGGATGC 
    TTCTTTCAAT TGATGAATTG GGTTGTTCGT TCATGGATTT CTCGTGACCC 
    TATATTTGTT AATACCTCTG TCTCGCTTTT GCACTCAATC ATCACCTCCG 
    NATCAGGTCC CTTTCTCTCT TCTCTTATAT TTGAGTTCTT ACTATAGGAT 
    TGTGCTCTGT TAGTGGGGAA ATTTTATCAT AGGTGTGCAC ATTGGTCGTT 
    GGTATTAGTC AATTTTCCTT TGGTGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7654436 [Map]; Strand: w
      • AT1G21790.1 - [+] show detail - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1605-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGCAAAGAAG CAGCGTCGCT AAGAAAAACT GCCCAGCCCC ATTCTTTTTC 
    CCTCCTGAAC TCCCAATCCC GTTCCTCGCC ATCGAAACCT CTCTGTCTCT 
    CTCGGAGATT GCTTGAGAAT CCGGCAAAGT TAACCCTAAA TTGGATTCTT 
    AGCTCAAACT TCGATATCCA TTTCCAATTT TGGCGGAAGA GACGATACAA 
    ATGCCTTCAC GTTATAAGCT

AT1G21790.1

Model type
Protein coding
Short Description
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Computational Description
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); Has 174 Blast hits to 174 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR