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15-1668-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3357178 [Map]; Strand: w
      • AT3G10720.2 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1668-1 - 5-prime edge 
    GCTCCGATAA CTCGCCGCAG TCCGCCACCG CCCCTATTTC CTCGGCCGTG 
    GCCGAGCCTG GTTTGCTTTC CACGCGCCGC GCGTAACTGG TGATGACTTT 
    GGATAGACGG CTTGCTTGCT TGAGGCATTG CTTTATAGTG AATTTGCCGT 
    AACGGTAAGG ATCTGACGGT GAGGATTTGA CAGCGTTGAG GATCGTACGG 
    CAAAGCT

AT3G10720.2

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily
Computational Description
Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G04970.1); Has 4750 Blast hits to 3228 proteins in 426 species: Archae - 6; Bacteria - 642; Metazoa - 199; Fungi - 573; Plants - 2288; Viruses - 376; Other Eukaryotes - 666 (source: NCBI BLink).
Link
InterPro Scan - TAIR