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15-1824-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
seedling (PO:0008037)
  • albino value (PATO:0000968)
    (Seedling::albino)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2708449 [Map]; Strand: w
      • AT5G08400.1 - [+] show detail - Protein of unknown function (DUF3531)
        Distance: 0; Region: exon1 (CDS)
      • AT5G08400.2 - [+] show detail - Protein of unknown function (DUF3531)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-1824-1 - 3-prime edge 
    ANTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATTC 
    CTGAGCTCAT GAGAAAGAAG GTAATCGTTG GGTCGAATTC ACTAAAAAGA 
    ATTCTCGTCT CTGTTATAGT TTCTTTGGTA GTGACTATTT GGCATGCGCT 
    GGGGCATTTA TATGTGTTGT TTCTATCGAT TGTGAAGTTT GGACATGTGT 
    ATGTTTACTA ATTATTCAGG TTGAAGAAAG AGTTAGGAAG AAGGGAAAAG 
    ATTTCCAGAA ACAGAAGACT GGTTCTGTGC TTTCTTTCAA AGTTAACTTC 
    AGAGAGTGAG AAACTTTTTT TCCATCTTGT CCATTAATTC ACTTTGGTTT 
    CTGCATTCCG CAACATAATA TAAGACTACT AGAATAATAT CCCATTCCAT 
    AAATTACTAA CCAAGTACTC TTATTTTGAT GACTGCAGTT TCAATCCTGT 
    AGATTCCTTC ATATGGTTTG AGCTCTATGG AACGCCTTCA GATCGAGATG 
    TTGATCTCAT TGGAAGTGTA AGAAATTGAT ATTCTTCTTG CTATTGCAAA 
    ACGTCGAGTC TTACTGCGAT GATTCAATGA TTCTTCCAAT TCTTTCTTTT 
    GACCACGAGT TTTGTTAACA GGTTATACAG GCATGGTATG TTATGGGGCG 
    ATTGGGCGCT TTCAATACAT CCAACTTGCA GGTTTGTTCA TCATCCCTTC 
    TGTTTCCTAG TTGCTAATCA TGTTTTTCTT CCCATTTCCA TGGTCATCTT 
    CATTCTCGTC TTACCGGTAT CATCTAAACT ATGATTGCAG CTAGCAACN

AT5G08400.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3531)
Computational Description
Protein of unknown function (DUF3531); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3531 (InterPro:IPR021920); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3531) (TAIR:AT4G29400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G08400.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF3531)
Computational Description
Protein of unknown function (DUF3531); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3531 (InterPro:IPR021920); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3531) (TAIR:AT4G29400.1); Has 314 Blast hits to 314 proteins in 83 species: Archae - 0; Bacteria - 120; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).
Link
InterPro Scan - TAIR