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15-1915-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 130810 [Map]; Strand: c
      • AT1G01320.2 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -233; Region: promoter
      • AT1G01320.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -240; Region: promoter
    Flanking Genome Sequence: 15-1915-1 - 3-prime edge
    TTTATAGGCT TGTTGTTCGC TGCTTTTTGG ATTATTCTAT TTGTGCCCCT 
    TTCTACTTCT ATCACAAATT CATGCTCTCT GCGTCAGAAC CAGTTTTTTA
    AAAAAGTAAA TGCAGAAATG GTAACCTTAA CTGCCCAGTT AAAAGACAGT
    CTAAGAAATC ACCGTTATTA GGTATTATAT GGCTCAAAAA TGTGTATTTT
    GTTTGAAGCA CGAGCTTGTT GGTCCAGATA TTTTTGTATG TTTCCATATA
    AAAGCAAGCT ATAATTAGTT CAAACAATCA CACGTTCTTT GATCCGCCTA
    GGCTGTCCCG AGTGTGAGCG AGGTGTGAGT GTCGCCCATG GGCATCGACA
    CCTTGCGGCT AGGAACTGGA ACGAGACGGG TAGCAAAGAT TTCGGAGTAG
    CACTTCATAC TACCGNGGGT TTTTTAAACC TTCCCCTAGT TNNGTCGANG
    GTATCCCGAN AATTATCGAA CCGTANCNAA GATGTTCTTG GCAACCNTCT
    TTTGATGGGA GTCCGGCTGN NNAAAAGCCG GCCAANGGGT GATGAACCNA
    AATGGNGAAC CCTTGNNCTN TNCTANGTTG GNATGGGCGT GCNTCTCTTG
    GGATANCTTG GNTTNANCAN TGCNGGGNCG TCGNANTTCA CGTGNCCNTT
    NATNNNNCNN ATNTNTTATC NTCNNGNNCG ANANANTTNN CNNANCATTN
    ATCTANNACN NNANNNNNTN NNNACNNNNT NNNNNTNCN

AT1G01320.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1); Has 12123 Blast hits to 4846 proteins in 494 species: Archae - 106; Bacteria - 3214; Metazoa - 4973; Fungi - 1823; Plants - 555; Viruses - 79; Other Eukaryotes - 1373 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01320.2

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1).
Link
InterPro Scan - TAIR