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15-1985-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26765231 [Map]; Strand: w
      • AT1G70985.1 - [+] show detail - hydroxyproline-rich glycoprotein family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-1985-1 - 5-prime edge 
    GGTGACCGTA ACGTTTATTC ATGGCCAATT TTTTATGAAA GATTTTGTTT 
    AATGGTAAAC AAGAAAATAT ATGTTTGTGT AAGAGAAAGA GAGAAGATTT 
    TCGAGACTTT CTTTCTTCTT GAGTCTGAGT GGAAATCAGT AAGTGAGTGG 
    CTTTTAAAAT AAGTTGTTTC ATGTGAGTTA AGACAAACGA CTAGTGATGA 
    ATATATTGAA TAATGACGAC TAACAAGGGC ATTGAGATTG AACGTGTCTT 
    GTGGCTACGA TACACTTGTT GTCTTGTAAA TTATGATACT TGGCTGTATA 
    ATTTCGTCCT TCTTTAACCA AATTGGGCCA CCGCTTGATA TAATTAAAAA 
    AATTCAGGTT TGGTTCCGAG ATCAGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7367344 [Map]; Strand: c
      • AT1G21050.1 - [+] show detail - Protein of unknown function, DUF617
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1985-1 - 3-prime edge 
    NNAGCAGGAA TAGTCNTTCG NCTTCNATCT TTGATGTCCC TGTTTGGTCT 
    ATGTTTNGTA ACGGAAGGAA AATGGGATTT GCCGTGAGGA GAAAGGTGAC 
    GGAGAACGAC GCCGTTTGCT TGAGGATGAT GCAGTCATGT GTCAGTCGGA 
    GCCGGAGTGG NGCCGGCGGA AGAGGAGGAT CAGATGNTGA ATTTGAGGGC 
    TAGGTTTGAG CGAGTTACTG GTNNNAGTGA CATCGGAATC GNTTCACATG 
    ATGAATCNAG GGTGGTAGNT ATGGACAAGA GCTNANCGTA NNNACCTTNN 
    CNATCGTGAN NNNATANNAC NGTATACANA AGCCNGGNCC GNTTAANCAN 
    ACNTGCCCTN NNNATANNAN TAANNNTACC NNTNNNNTNG TTNANNNTNC 
    NCCTNTGNTC NGCGAGNNNN GTNTCNCNNN TCGTTCCCAN GNTNNNNCCA 
    TCNANANNNN NTNCGCACGC CNNCGACCTN GANGGNNTNN NACANNCNTN 
    NNANTNNCAN NACANTCNTC GNTNCAACNN ANNCGANCNC ACGNGNNNNN 
    ANCGCACGNN NGGNCNCCGT CNAANNNCGN NNCGNNATTA CNNCCCNGGN 
    CCNNCGTANC GTNNNNCCNC NNTATNTANT TNNNCNANCN CTANAANNAT 
    NNACCACNTN AANCTNCACG ANGNANACGG NNTATNNNAG GNNGANGNCA 
    CNTATANANN CGACCNCNNT GTNNAATTNA NAANNACNNG NNTATANNCC 
    AAACANNNNA ANCAANGCNT CNANATTGCG CNCGN

AT1G21050.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF617
Computational Description
Protein of unknown function, DUF617; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT1G76610.1); Has 257 Blast hits to 256 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G70985.1

Model type
Protein coding
Short Description
hydroxyproline-rich glycoprotein family protein
Computational Description
hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G23050.1); Has 1488 Blast hits to 893 proteins in 162 species: Archae - 2; Bacteria - 187; Metazoa - 240; Fungi - 90; Plants - 878; Viruses - 17; Other Eukaryotes - 74 (source: NCBI BLink).
Link
InterPro Scan - TAIR