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15-2019-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10482686 [Map]; Strand: w
      • AT5G28510.1 - [+] show detail - beta glucosidase 24
        Distance: 0; Region: intron6 (CDS)
    Flanking Genome Sequence: 15-2019-1 - 3-prime edge 
    AACACTTGTA TATATATATA AGTGAGATGG ATAAATCCAT TTTTGGTCAA 
    TTTATTTTGA CTTGGAAGCA CATGAAATTT AATTCACAGT CACACAACGT 
    GATTTAAATT AATGCAATAT CCTTTTGCCA AAACAGGAAA GATTTTCGGG 
    AGTATGCNTG AGTTTGTTTT CAAAGAATAT GGTGGAAAAG TGAAACATTG 
    GATCACTTTT AACGAGCCAT GGGTTTTCGC GCATGCCGGT TATGACGTTG 
    GTAAGAAAGC ACCTGGACGT TGTTCTCCTT ACGCCAAGGA CGAAACTGTC 
    AAGGGAGATT GTCTAGGCGG ACGATCAGGT TATGAGGCTT ATCTAGTCAG 
    TCACAACCTC CTCAACGCTC ATGCAGAAGC CGTTGAAGCT

AT5G28510.1

Model type
Protein coding
Short Description
beta glucosidase 24
Computational Description
beta glucosidase 24 (BGLU24); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G09260.1); Has 11366 Blast hits to 11018 proteins in 1472 species: Archae - 140; Bacteria - 7863; Metazoa - 718; Fungi - 202; Plants - 1442; Viruses - 0; Other Eukaryotes - 1001 (source: NCBI BLink).
Link
InterPro Scan - TAIR