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15-2039-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2787883 [Map]; Strand: w
      • AT1G08730.1 - [+] show detail - Myosin family protein with Dil domain
        Distance: 0; Region: exon36 (CDS)
    Flanking Genome Sequence: 15-2039-1 - 3-prime edge 
    GCTATGGGTG CCGTATTTGT CGTCCCAGTA CATGGTACTG ATTCTGTATA 
    ACTGTTGTAT GCTTAGTACC TGTCCACAGT TTCAATTTAT CAGTAAATGG 
    ACACCTTACA AAGCCCTGAT TTTTCTTTTC TTTTCTTCTT TTATAAGAAC 
    ATTGGCAAGT GTTTCATAAG GAATATAAGA AAGTTGTGAT AGACTGAGCA 
    GGGGATACAA CAACTTACCG GGCAAAGATC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2787973 [Map]; Strand: w
      • AT1G08730.1 - [+] show detail - Myosin family protein with Dil domain
        Distance: 0; Region: intron36 (CDS)
    Flanking Genome Sequence: 15-2039-1 - 5-prime edge 
    GGGATAAACN AACAAAATCG GTTATACGAT AACGGTCGGT ACTGATGTAA 
    GTGATCACCT TAAGCTACTG ATGATCTGTG TAATTATATC CTTAATTAGC 
    TCATAGATAT ACCTCTCTCT CTCTCTCTGA CTATGTATAA TAGGTAATAG 
    CAAATATGAG GGTGCTAATG ACAGAAGATT CGAACAATGC TGTTAGCAAC 
    TCATTCCTTT TGGATGACGA CTCGNGGTTG TTACAAGACC AACAAGTTTC 
    GTTATGGGCA CTTTGATGAC GTCTTCTAAC AGGTTTTGAT GATTTTGCAG 
    CATCCCTTTC TCGGNTGATG ATTTATCAAA GTCGATGGAG AAATTTGAAA 
    TAGCGGATAT CGAACCGCCA CCTTTAATCC GGGAGAATT

AT1G08730.1

Model type
Protein coding
Short Description
Myosin family protein with Dil domain
Curator Summary
Class XI myosin gene
Computational Description
XIC; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G54560.1); Has 57567 Blast hits to 36765 proteins in 2556 species: Archae - 784; Bacteria - 7621; Metazoa - 29049; Fungi - 4176; Plants - 2435; Viruses - 163; Other Eukaryotes - 13339 (source: NCBI BLink).
Link
InterPro Scan - TAIR