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15-2176-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7645397 [Map]; Strand: w
      • AT1G21750.1 - [+] show detail - PDI-like 1-1
        Distance: -303; Region: promoter
      • AT1G21750.2 - [+] show detail - PDI-like 1-1
        Distance: -304; Region: promoter
    Flanking Genome Sequence: 15-2176-1 - 5-prime edge
    GATTTAAGAT CTATGACCAT TTACTTGCAC GAAGTCACGG ACCTGAGATC 
    TCACAACAAG ATCAACGAAA GAGAAGAAGC CACGTCATTG TCGATATCGT
    GACGCTTGTA CATTGGTGCN GGAATAGTGT GTCTTCGGTT TAGACAATTT
    TTCTCTTCTT AAAATTACTT TTTACTGCTG GTAAAATGGA GTAAATAACT
    AAATAAATTT TATAACGGCC TAGGTCAAAA TTATCAAGAC ACTGTATAAA
    CATTAAAATT CTTGCCAAAT CCCTATAAAC TATGACGACG TAATACCCAA
    TTAGAGATAG CCACGTGGAT GTATGACCAA TTTAGGAGCA TTCAGTTTTC
    GTGTTTTGCA GTGATAAATA TCTCTGAGAG CTAACCCCGG AGAGCTTACA
    GAATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7246631 [Map]; Strand: w
      • AT1G20840.1 - [+] show detail - tonoplast monosaccharide transporter1
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 15-2176-1 - 3-prime edge
    CTTGACCTGT CCCAGACAAA ATAGCTCACT TGGGCTACGC TCTCGCCACG 
    GAAGCT

AT1G20840.1

Model type
Protein coding
Short Description
tonoplast monosaccharide transporter1
Curator Summary
The protein encoded by this gene is found in the tonoplast (vacuole membrane) of Arabidopsis cells. The gene is expressed at highest levels in juvenile (sink) and adult (source) leaves, followed by flower tissues.
Computational Description
tonoplast monosaccharide transporter1 (TMT1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, nucleoside transmembrane transporter activity; INVOLVED IN: in 6 processes; LOCATED IN: plant-type vacuole membrane, plasma membrane, vacuole, membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: tonoplast monosaccharide transporter2 (TAIR:AT4G35300.4); Has 47782 Blast hits to 35006 proteins in 2411 species: Archae - 763; Bacteria - 22324; Metazoa - 7189; Fungi - 11789; Plants - 3723; Viruses - 0; Other Eukaryotes - 1994 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21750.1

Model type
Protein coding
Short Description
PDI-like 1-1
Curator Summary
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.
Computational Description
PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Disulphide isomerase (InterPro:IPR005788), Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 31573 Blast hits to 17834 proteins in 2924 species: Archae - 337; Bacteria - 15428; Metazoa - 5451; Fungi - 1644; Plants - 2422; Viruses - 29; Other Eukaryotes - 6262 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21750.2

Model type
Protein coding
Short Description
PDI-like 1-1
Curator Summary
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.
Computational Description
PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 30765 Blast hits to 17459 proteins in 2902 species: Archae - 337; Bacteria - 14753; Metazoa - 5498; Fungi - 1629; Plants - 2433; Viruses - 29; Other Eukaryotes - 6086 (source: NCBI BLink).
Link
InterPro Scan - TAIR