1. Home
  2. Mutant Lines
  3. 15-2185-1

15-2185-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11446455 [Map]; Strand: c
      • AT1G31880.1 - [+] show detail - DZC (Disease resistance/zinc finger/chromosome condensation-like region) doma...
        Distance: 0; Region: intron2 (5UTR)
    Flanking Genome Sequence: 15-2185-1 - 3-prime edge
    TATCAAAATT TTATTTTTTG GATTGTAATG ATTAAGAAAA AAAGAAGAAG 
    TCGTTTTCTG AGGTGAGAAT AATAATGGTT TTTGTATCAG TTTTTGCCTT
    TGCTTTTGAT ATCAAAACAG AGTTTTTTTC GTGATTCGTG ATTGTTTTTG
    CGATTTTATC TTTTACTTTG GATATAGTTT TAGTTTTCAT GTCGCGACAC
    GCTTTAGATT GGTCCATCAT CACTCAAAAC CCTAAAAATA GAAACCAATC
    TCTTTTTCTT TTTCTTAACA CGTGACTGTC AAGATTCCAT TTTCTTGTTA
    TATTTTTCAA TTTTGTTTTG CTTTTCTAGT GTTTCCAATT GTTTTCTTCT
    TTACTTATGT ATTTGTCTTG ATCGATGTTA AACACGCGGA ATCAGAACAT
    ATTATTTGAT TCTCTTGAGT CATCACAATA ATCTGATTTT TTTTAAAAAT
    GTCATAAATT TCGGCTACTG CAAAAAAAAT GTAATTATTC TTCNAACTTT
    TGTTAGTTGA GGGATGGGTT TAGGATCTTT TGCTGCACAC AAAAGTATTA
    AGTTATTCTT TAACAAAAAA AAAACCTTTT TAANGTAAAA NAAAAAACCT
    TTNGCCNNTN TTANNATGGN CTTNAAAATN TNTTNTNNCT NGNAAAAAAG
    GGGNTNANCC AATTTNNNGG GGNTNAAATT NNCCCAATNA NTTTTNAAAA
    NNTNANNNTT TNTAANNGGG GNCCNNTTTT NTNATCCCAA NCNNTTTTTT
    TT

AT1G31880.1

Model type
Protein coding
Short Description
DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein
Curator Summary
Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth.
Computational Description
BREVIS RADIX (BRX); CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591); BEST Arabidopsis thaliana protein match is: BREVIS RADIX-like 1 (TAIR:AT2G35600.1); Has 707 Blast hits to 407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 705; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR