1. Home
  2. Mutant Lines
  3. 15-2217-1

15-2217-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7768154 [Map]; Strand: w
      • AT1G22040.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 15-2217-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT CTCTGGAATT GGACTTAGCT CTTGAGGTTT 
    ATGTTTTGAT CTATGTCCGG ATTCATANAA AAATAAAATT AGGGTTTACT 
    TGTATCAGGA TTAGTGTTCG CAAGCCCATT TATTGATCAT GTGTGTTTTT 
    ATTGCAAAGN TTGGTTTTTT ATTCCTAATT ACGCCTAATT GTTGGGAAAT 
    NTATGATTNG TTGCAGTGAC TCTTCTTGAT TTCATCAATA ATGGGTTCTG 
    TTATGAGTTT GAGCTGTTCC AAGAGGAAAG CAACGAGTCA GGACGTTGAG 
    TGTTCAAGCG AATCTCGTAA AAGACGAAAG ATATCTTCAG AGAACGATGA 
    AGAAGAGTGT TGTAGATTGA TTCCAAGTCT TCCTGATGAG TTATCTATAC 
    AGATTCTTGC TAGGCTTCCT AGAATTTGTT ACTCGAGTGT TCGGTTGGTT 
    TCTCGGAGGT GGAGATCGGC TGTTTCGACT TCTGAGGTGT ATAGTTTGAG 
    GAAAGAACTT GGGAGGACTG AGGAGTGGCT CTATGTGTTG ACTAAAGGTC 
    ATGAGGATAA NCTACCANCC CGGGCCGNNG ACCACGCGGC CCCTANA

AT1G22040.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G55270.1); Has 10813 Blast hits to 5578 proteins in 328 species: Archae - 18; Bacteria - 659; Metazoa - 8206; Fungi - 35; Plants - 1449; Viruses - 72; Other Eukaryotes - 374 (source: NCBI BLink).
Link
InterPro Scan - TAIR