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15-2257-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 10685805 [Map]; Strand: c
      • AT3G28510.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-2257-1 - 3-prime edge 
    TCCGAGCCTA TGTGGAGAGA TACTTCCACA AGATGATTGG ATGGATCTCT 
    TACTACGTTG ACATCAAATT CACCGAGTAC ACAGATGAAG GTCTGAAGAG 
    AAGCCAAGCC TACGACTCCA TACGCAACTA CTTTAGCNGT CGAAATCAAC 
    NGGCCTCTTG CTAAAAGACT AAAGGCCAAC GAAACGAAAA ACAGCAAATC 
    TTTGGTGTTT AGTATGGATG ATCATGAGGA AATTGAAGAT GAGTTCGAAG 
    GTGTGAAGGT GAAGTGGTAT TCGAATGTGA AAGTGATTCA GCCTCAGTCT 
    AATTATGGTC GACGCAGCTC AGAGGAGAGA AGGCACTTTA CTCTTAGTTT 
    CCATAGGCGA CACCGAGGTA TGATCATTGA GACTTATCTT GATCATGTTT 
    TGAGAGAAGG GAAAGCTATT GGATTGATGA ACAGAGAGAG GAAGCT

AT3G28510.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28540.1); Has 37676 Blast hits to 28869 proteins in 2974 species: Archae - 1302; Bacteria - 8814; Metazoa - 8958; Fungi - 4310; Plants - 3042; Viruses - 177; Other Eukaryotes - 11073 (source: NCBI BLink).
Link
InterPro Scan - TAIR